Evidence map›Paper›PMID 38426285›Full record

ArticleHaematologica2024

Juan M Barajas, Masayuki Umeda, Lisett Contreras, Mahsa Khanlari, Tamara Westover, Michael P Walsh, Emily Xiong, Chenchen Yang, Brittney Otero, Marc Arribas-Layton and 6 more

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Immunophenotypic, Cytogenetic, and Molecular Characterization of NUP98-Rearranged Pediatric Myeloid Neoplasms.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2026
    Article
  3. Review
  4. Article
  5. Using genomics to refine pediatric AML risk stratification.Hematology. American Society of Hematology. Education Program · 2025
    Review
  6. Review
  7. Review
  8. Article
  9. Review
4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Juan M BarajasDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Masayuki UmedaDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Lisett ContrerasDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Mahsa KhanlariDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Tamara WestoverDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Michael P WalshDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Emily XiongDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Chenchen YangMission Bio, South San Francisco, CA.
Brittney OteroMission Bio, South San Francisco, CA.
Marc Arribas-LaytonMission Bio, South San Francisco, CA.
Sherif AbdelhamedDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Guangchun SongDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Xiaotu MaDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.
Melvin E Thomas RdDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Jing MaDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.
Jeffery M KlcoDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN. jeffery.klco@stjude.org.
St. Jude Children's Research Hospital · USMission Bio (United States) · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE J. BAKER · 1985 to 2026
$166.9M
Project 4U54CA243124 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MULLIGHAN, CHARLES G. · 2019 to 2023
$10.5M
Childhood Hematological Malignancies Training ProgramT32CA236748 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Charles G Mullighan · 2019 to 2026
$2.0M
UBTF Tandem Duplications in Pediatric Acute Myeloid LeukemiaR01CA276079 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Jeffery M Klco · 2023 to 2026
$1.6M
Functional evaluation of clonal hematopoiesis of indeterminate potential (CHIP)F32HL154636 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BARAJAS, JUAN M. · 2020 to 2021
$130k
NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA276079NCI NIH HHS T32 CA236748NCI NIH HHS U54 CA243124NHLBI NIH HHS F32 HL154636
6 · The paper itself

Abstract

Recent genomic studies in adult and pediatric acute myeloid leukemia (AML) demonstrated recurrent in-frame tandem duplications (TD) in exon 13 of upstream binding transcription factor (UBTF). These alterations, which account for approximately 4.3% of AML in childhood and about 3% in adult AML aged <60 years of age, are subtype-defining and associated with poor outcomes. Here, we provide a comprehensive investigation into the clinicopathological features of UBTF-TD myeloid neoplasms in childhood, including 89 unique pediatric AML and 6 myelodysplastic syndrome (MDS) cases harboring a tandem duplication in exon 13 of UBTF. We demonstrate that UBTF-TD myeloid tumors are associated with dysplastic features, low bone marrow blast infiltration, and low white blood cell count. Furthermore, using bulk and single-cell analyses, we confirm that UBTF-TD is an early and clonal event associated with a distinct transcriptional profile, whereas the acquisition of FLT3 or WT1 mutations is associated with more stem cell-like programs. Lastly, we report rare duplications within exon 9 of UBTF that phenocopy exon 13 duplications, expanding the spectrum of UBTF alterations in pediatric myeloid tumors. Collectively, we comprehensively characterize pediatric AML and MDS with UBTF-TD, and highlight key clinical and pathologic features that distinguish this new entity from other molecular subtypes of AML.

Indexed as

Gene DuplicationLeukemia, Myeloid, AcuteMyelodysplastic SyndromesAdolescentChildChild, PreschoolExonsFemaleHumansInfantMaleMutationTandem Repeat SequencesTranscription FactorsTranscription Factors

Identifiers

PMID38426285
PMCPMC11290532
OpenAlexW4392287394

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.