Evidence map›Paper›PMID 38438717›Full record

ArticleJournal of applied genetics2024

Novel DNA methylation biomarkers for early diagnosis of oral tongue squamous cell carcinoma (OTSCC).

Hayat Ali Abdullah Alafaria, Areej Saud Jalal

Erratum issuedAbstract read
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In one paragraph

Article in Journal of applied genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Hayat Ali Abdullah AlafariaDepartment of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, 11671, Riyadh, Saudi Arabia.ORCID http://orcid.org/0000-0001-9679-6928
Areej Saud JalalDepartment of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, 11671, Riyadh, Saudi Arabia. asjalal@pnu.edu.sa.ORCID http://orcid.org/0009-0004-4832-1521
Princess Nourah bint Abdulrahman University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oral tongue squamous cell carcinoma (OTSCC) is the most common malignancy type among males across the world. However, analysis of molecular markers could be useful in detecting the early-stage OTSCC, which would allow optimal clinical treatments and prolong the survival rate of patients consequently. The study has the objective of detecting the role of salivary biomarkers based on gene promoter hypermethylation. Sample data from 45 OTSCC and normal groups were analyzed to exhibit the methylation levels of salivary biomarkers (TRH, FHIT, MGMT, p16, and RASSF1A). The specificity and sensitivity analysis of methylation biomarkers was conducted in addition to the receiver operating characteristic (ROC) curve for both early-stage and advanced OTSCC stages. Quantitative data findings showed the perfect sensitivity and specificity for TRH, MGMT, p16, and RASSF1A with 100%, and > 90%, respectively. In addition, the results indicated an inefficient area under curves (> 0.7) for these biomarkers to detect the OTSCC. There were no significant differences observed between TRH and FHIT and p16 and MGMT based on the Wilcoxon signed-rank test. The methylation statuses of genes TRH, RASSF1A, p16, and MGMT might become utilized as predictive biomarkers for clinical application in early diagnosis of OTSCC and noninvasive oral cancer screening.

Indexed as

Biomarkers, TumorCarcinoma, Squamous CellDNA MethylationDNA Repair EnzymesEarly Detection of CancerTongue NeoplasmsTumor Suppressor ProteinsAcid Anhydride HydrolasesAdultAgedBis(5'-adenosyl)triphosphataseCyclin-Dependent Kinase Inhibitor p16DNA Modification MethylasesFemaleHumansMaleAcid Anhydride HydrolasesBiomarkers, TumorBis(5'-adenosyl)triphosphataseCyclin-Dependent Kinase Inhibitor p16DNA Modification MethylasesDNA Repair EnzymesMGMT protein, humanNeoplasm ProteinsRASSF1 protein, humanTumor Suppressor Proteins06-Methylaguanine-DNA methyltransferase (MGMT)DNA methylationFragile histidine triad diadenosine triphosphatase (FHIT)Liquid biopsyOral tongue squamous cell carcinoma (OTSCC)p16Salivary biomarkersThyrotropin releasing hormone (TRH)

Identifiers

PMID38438717
OpenAlexW4392468195

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.