ArticleHorticulture research2024
PMAT: an efficient plant mitogenome assembly toolkit using low-coverage HiFi sequencing data.
Article in Horticulture research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.
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Who cites it
93 citing papers in PubMed.
- Exploring the Mitochondrial Genomes ofEcology and evolution · 2026Article
- A Compact Multipartite Mitogenome ofInternational journal of molecular sciences · 2026Article
- Assembly and comparative analysis of the complete mitochondrial genome of the endangered plant Fraxinus mandshurica.BMC plant biology · 2026Article
- A Chromosome-Scale Genome Assembly and Annotation of the Antarctic Pearlwort Colobanthus quitensis (Caryophyllaceae).Genome biology and evolution · 2026Article
- Phylogenomic conflict inPlant diversity · 2026Article
- Characterization of the mitochondrial genome of the aquatic vegetable Eleocharis dulcis (Burm. f.) Trin. ex Hensch.: the first representative of genus Eleocharis with evolutionary insights in Cyperaceae.BMC plant biology · 2026Article
- Organization and comparative analysis of the multi-chromosomal mitochondrial genome in Tagetes erecta (Asteraceae).BMC genomics · 2026Article
- RhoMitoAnnotator and Polypods, Bioinformatics Tools for theInternational journal of molecular sciences · 2026Article
- Comprehensive analyses of different putative ploidy levels in organelle genomes of an important medicinal plant Polygonatum kingianum Collett & Hemsl.BMC plant biology · 2026Article
- Complete mitochondrial genome assembly and analysis of Astragalus (Papilionoideae: Fabaceae) species revealed its RNA editing and phylogenetic implications.BMC plant biology · 2026Article
- Mitochondrial genome of the invasive weed Amaranthus palmeri: structural features, RNA editing, and evolutionary insights.BMC plant biology · 2026Article
- Characteristics of the mitochondrial genome of the invasive plant Tagetes minuta (Asteraceae) on the Qinghai-Tibet Plateau and its evolutionary significance.BMC genomics · 2026Article
- The Mitochondrial Genome ofGenes · 2026Article
- Comparative analysis of complete mitogenomes of two ornamental plants Chimonanthus salicifolius and Chimonanthus praecox in the family Calycanthaceae.BMC plant biology · 2026Article
- The complete mitochondrial genome of Prinsepia uniflora (Rosaceae): De novo assembly, characterization, and phylogenetic analysis.BMC genomics · 2026Article
- Cookbook for plant genome sequences.BMC genomics · 2026Review
- Mitochondrial genomes of Mentha reveal structural complexity and evolutionary diversity.Molecular genetics and genomics : MGG · 2026Article
- Article
- Polyploidy drives structural and functional evolution in Camellia mitochondrial genomes.BMC genomics · 2026Article
- Complete Mitochondrial Genome Sequence Structure and Phylogenetic Analysis of Choy Sum (International journal of molecular sciences · 2026Article
33 more citing papers are in PubMed but not listed here.
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Authors and funding
10 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Complete mitochondrial genomes (mitogenomes) of plants are valuable resources for nucleocytoplasmic interactions, plant evolution, and plant cytoplasmic male sterile line breeding. However, the complete assembly of plant mitogenomes is challenging due to frequent recombination events and horizontal gene transfers. Previous studies have adopted Illumina, PacBio, and Nanopore sequencing data to assemble plant mitogenomes, but the poor assembly completeness, low sequencing accuracy, and high cost limit the sampling capacity. Here, we present an efficient assembly toolkit (PMAT) for
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