Evidence map›Paper›PMID 38476697›Full record

ArticleEcology and evolution2024

A pooled-sample draft genome assembly provides insights into host plant-specific transcriptional responses of a Solanaceae-specializing pest,

Jay K Goldberg, Carson W Allan, Dario Copetti, Luciano M Matzkin, Judith Bronstein

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jay K GoldbergDepartment of Ecology and Evolutionary Biology University of Arizona Tucson Arizona USA.ORCID https://orcid.org/0000-0002-9851-5090
Carson W AllanDepartment of Entomology University of Arizona Tucson Arizona USA.
Dario CopettiArizona Genomics Institute University of Arizona Tucson Arizona USA.
Luciano M MatzkinDepartment of Ecology and Evolutionary Biology University of Arizona Tucson Arizona USA.
Judith BronsteinDepartment of Ecology and Evolutionary Biology University of Arizona Tucson Arizona USA.
University of Arizona · USJohn Innes Centre · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The assembly of genomes from pooled samples of genetically heterogenous samples of conspecifics remains challenging. In this study, we show that high-quality genome assemblies can be produced from samples of multiple wild-caught individuals. We sequenced DNA extracted from a pooled sample of conspecific herbivorous insects (Hemiptera: Miridae:

Indexed as

genomicshemipteraherbivoryinteractionsplant‐insectsolanaceae

Identifiers

PMID38476697
PMCPMC10928254
OpenAlexW4392712527

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.