Evidence map›Paper›PMID 38489110›Full record

ArticleAntonie van Leeuwenhoek2024

Expression of Staphylococcus aureus translation elongation factor P is regulated by a stress-inducible promotor.

Xingxing Zheng, Xiuhui Sun, Weiwei Xiang, Haiyan Ni, Long Zou, Zhong-Er Long

Abstract read
PubMed Publisher
In one paragraph

Article in Antonie van Leeuwenhoek, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xingxing ZhengNanchang Key Laboratory of Microbial Resources Exploitation and Utilization From Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China.
Xiuhui SunChongren County Center for Disease Prevention and Control, Chongren, 344203, China.
Weiwei XiangNanchang Key Laboratory of Microbial Resources Exploitation and Utilization From Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China.
Haiyan NiNanchang Key Laboratory of Microbial Resources Exploitation and Utilization From Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China.
Long ZouNanchang Key Laboratory of Microbial Resources Exploitation and Utilization From Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China.
Zhong-Er LongNanchang Key Laboratory of Microbial Resources Exploitation and Utilization From Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China. longzhonger@163.com.ORCID http://orcid.org/0000-0002-1639-8258
Jiangxi Normal University · CN

Funding

National Natural Science Foundation of China 31960015Natural Science Foundation of Jiangxi Province, China 20192BAB204001
6 · The paper itself

Abstract

Translation elongation factor P, expressed by the efp gene, is a conserved protein closely related to bacterial virulence and environmental stress regulation responses, however, little is known about the efp gene expression regulations. Here, the strain of Staphylococcus aureus subsp. aureus NCTC 8325 was taken as the research object and cultured under different conditions, including different culture temperatures, pH, and antibiotics, to study the expression of the efp gene in S. aureus by qRT-PCR, the results showed that the expression of the efp gene is upregulated under high temperature (40 °C), acidic (pH 5.4) or alkaline (pH 9.4) culture conditions, but upregulated early and downregulated later under the conditions of 0.5 MIC antibiotics (chloramphenicol at the final concentration of 2 μg/mL and vancomycin at the final concentration of 0.25 μg/mL), indicating that the efp promoter in S. aureus is inducible. The efp promoter sequence and structure in S. aureus were predicted by bioinformatics methods, and the predicted promoter was validated by constructing a promoter-probe vector and a series of promoter mutants, the results showed that the efp promoter sequence in S. aureus, named Pro, located in 1,548,179-1,548,250 of the S. aureus genome (NC_007795.1), and the sequence of - 10 element is CCTTATAGT, - 35 element is TTTACT. The results above could lay a foundation for screening transcription factors involved in the expression of the efp gene and then exploring the transcriptional regulation mechanism of EF-P in S. aureus.

Indexed as

Peptide Elongation FactorsStaphylococcal InfectionsStaphylococcus aureusAnti-Bacterial AgentsBacterial ProteinsGene Expression Regulation, BacterialHumansTranscription FactorsAnti-Bacterial AgentsBacterial Proteinsfactor EF-PPeptide Elongation FactorsTranscription FactorsElongation factor PGene expression regulationPromoterPromoter-probe vectorStaphylococcus aureus

Identifiers

PMID38489110
OpenAlexW4392864110

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.