Evidence map›Paper›PMID 38493594›Full record

ArticleEuropean journal of cell biology2024

Arp2/3 complex- and formin-mediated actin cytoskeleton networks facilitate actin binding protein sorting in fission yeast.

Kaitlin E Homa, Glen M Hocky, Cristian Suarez, David R Kovar

Open access · goldAbstract read
In one paragraph

Article in European journal of cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kaitlin E HomaDepartment of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, IL, United States.
Glen M HockyDepartment of Chemistry, New York University, New York, NY, United States.
Cristian SuarezDepartment of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, IL, United States.
David R KovarDepartment of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, IL, United States; Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL, United States. Electronic address: drkovar@uchicago.edu.
University of Chicago · USNew York University · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Mechanisms of Formin-Mediated Actin Filament Assembly - Renewal 01 - ResubmissionR01GM079265 · NIGMS · UNIVERSITY OF CHICAGO · PI KOVAR, DAVID R · 2007 to 2023
$4.5M
Harnessing simulations to uncover molecular mechanisms of mechanosensingR35GM138312 · NIGMS · NEW YORK UNIVERSITY · PI Glen Hocky · 2020 to 2026
$3.0M
Functional Reconstitution of Yeast ExocytosisR01GM071832 · NIGMS · RICE UNIVERSITY · PI MCNEW, JAMES A · 2006 to 2010
$1.4M
NIGMS NIH HHS R01 GM071832NIGMS NIH HHS R01 GM079265NIGMS NIH HHS R35 GM138312NIGMS NIH HHS T32 GM007183
6 · The paper itself

Abstract

While it is well-established that F-actin networks with specific organizations and dynamics are tightly regulated by distinct sets of associated actin-binding proteins (ABPs), how ABPs self-sort to particular F-actin networks remains largely unclear. We report that actin assembly factors Arp2/3 complex and formin Cdc12 tune the association of ABPs fimbrin Fim1 and tropomyosin Cdc8 to different F-actin networks in fission yeast. Genetic and pharmacological disruption of F-actin networks revealed that Fim1 is preferentially directed to Arp2/3-complex mediated actin patches, whereas Cdc8 is preferentially targeted to formin Cdc12-mediated filaments in the contractile ring. To investigate the role of Arp2/3 complex- and formin Cdc12-mediated actin assembly, we used four-color TIRF microscopy to observe the in vitro reconstitution of ABP sorting with purified proteins. Fim1 or Cdc8 alone bind similarly well to filaments assembled by either assembly factor. However, in 'competition' reactions containing both actin assembly factors and both ABPs, ∼2.0-fold more Fim1 and ∼3.5-fold more Cdc8 accumulates on Arp2/3 complex branch points and formin Cdc12-assembled actin filaments, respectively. These findings indicate that F-actin assembly factors Arp2/3 complex and formin Cdc12 help facilitate the recruitment of specific ABPs, thereby tuning ABP sorting and subsequently establishing the identity of F-actin networks in fission yeast.

Indexed as

Actin CytoskeletonActin-Related Protein 2-3 ComplexMicrofilament ProteinsSchizosaccharomycesSchizosaccharomyces pombe ProteinsActinsCell Cycle ProteinsCytoskeletal ProteinsMembrane GlycoproteinsProtein TransportActin-Related Protein 2-3 ComplexActinsCdc12 protein, S pombeCdc8 protein, S pombeCell Cycle ProteinsCytoskeletal ProteinsMembrane GlycoproteinsMicrofilament ProteinsplastinSchizosaccharomyces pombe ProteinsActin-binding proteinsActin cytoskeletonArp2/3 complexFimbrinForminTropomyosin

Identifiers

PMID38493594
PMCPMC11211059
OpenAlexW4392876302

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.