Evidence map›Paper›PMID 38494839›Full record

ArticleJournal of cellular and molecular medicine2024

Differential genetic mutations and immune cell infiltration in high- and low-risk STAD: Implications for prognosis and immunotherapy efficacy.

Yin-Yong Deng, Yan Sun, Si-Jia Wu, Tian-Ying Zhang, Jie Yang, Kai Liu

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yin-Yong DengDepartment of General Surgery, West China Hospital, Sichuan University, Chengdu, China.
Yan SunDepartment of West China School of Medicine, Sichuan University, Chengdu, China.
Si-Jia WuDepartment of West China School of Medicine, Sichuan University, Chengdu, China.
Tian-Ying ZhangDepartment of West China School of Medicine, Sichuan University, Chengdu, China.
Jie YangDepartment of General Surgery, West China Hospital, Sichuan University, Chengdu, China.
Kai LiuDepartment of General Surgery, West China Hospital, Sichuan University, Chengdu, China.ORCID 0000-0002-1889-8053
Sichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigates genetic mutations and immune cell dynamics in stomach adenocarcinoma (STAD), focusing on identifying prognostic markers and therapeutic targets. Analysis of TCGA-STAD samples revealed C > A as the most common single nucleotide variant (SNV) in both high and low-risk groups. Key mutated driver genes included TTN, TP53 and MUC16, with frame-shift mutations more prevalent in the low-risk group and missense mutations in the high-risk group. Interaction analysis of hub genes such as C1QA and CD68 showed significant correlations, impacting immune cell infiltration patterns. Using ssGSEA, we found higher immune cell infiltration (B cells, CD4

Indexed as

AdenocarcinomaStomach NeoplasmsCD8-Positive T-LymphocytesHumansImmunotherapyMutationdrug sensitivity analysisgenetic mutationsimmune cell infiltrationrisk modelstomach adenocarcinoma (STAD)

Identifiers

PMID38494839
PMCPMC10945082
OpenAlexW4392920362

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.