Evidence map›Paper›PMID 38499787›Full record

ArticleThe EMBO journal2024

Niche Tet maintains germline stem cells independently of dioxygenase activity.

Renjun Tu, Zhaohua Ping, Jian Liu, Man Lung Tsoi, Xiaoqing Song, Wei Liu, Ting Xie

Open access · diamondAbstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 citations in OpenAlex.

  1. International journal of molecular sciences · 2026
    Article
  2. Review
  3. Article
  4. Science advances · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Renjun Tu *Division of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong Special Administrative Region, China.ORCID http://orcid.org/0000-0003-2764-2575
Zhaohua Ping *Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO, USA.ORCID http://orcid.org/0000-0002-4671-7862
Jian LiuShenzhen Key Laboratory for Neuronal Structural Biology, Biomedical Research Institute, Shenzhen Peking University-The Hong Kong University of Science and Technology Medical Centre, Shenzhen, Guangdong, China.
Man Lung TsoiDivision of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong Special Administrative Region, China.
Xiaoqing SongStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO, USA.
Wei LiuShenzhen Key Laboratory for Neuronal Structural Biology, Biomedical Research Institute, Shenzhen Peking University-The Hong Kong University of Science and Technology Medical Centre, Shenzhen, Guangdong, China.
Ting XieDivision of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong Special Administrative Region, China. tgx@ust.hk.ORCID http://orcid.org/0000-0003-4769-986X
Hong Kong University of Science and Technology · HKStowers Institute for Medical Research · USChinese University of Hong Kong · HK

Funding

Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
DROSOPHILA GENOMICS RESOURCE CENTERP40OD010949 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Andrew Zelhof · 2012 to 2026
$9.4M
Investigation of Niche Control of Germline Stem Cell Lineage DifferentiationR01HD097664 · NICHD · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI XIE, TING · 2019 to 2020
$685k
NICHD NIH HHS R01 HD097664NIGMS NIH HHS R01 GM084947NIH HHS P40 OD010949
6 · The paper itself

Abstract

Ten-eleven translocation (TET) proteins are dioxygenases that convert 5-methylcytosine (5mC) into 5-hydroxylmethylcytosine (5hmC) in DNA and RNA. However, their involvement in adult stem cell regulation remains unclear. Here, we identify a novel enzymatic activity-independent function of Tet in the Drosophila germline stem cell (GSC) niche. Tet activates the expression of Dpp, the fly homologue of BMP, in the ovary stem cell niche, thereby controlling GSC self-renewal. Depletion of Tet disrupts Dpp production, leading to premature GSC loss. Strikingly, both wild-type and enzyme-dead mutant Tet proteins rescue defective BMP signaling and GSC loss when expressed in the niche. Mechanistically, Tet interacts directly with Bap55 and Stat92E, facilitating recruitment of the Polybromo Brahma associated protein (PBAP) complex to the dpp enhancer and activating Dpp expression. Furthermore, human TET3 can effectively substitute for Drosophila Tet in the niche to support BMP signaling and GSC self-renewal. Our findings highlight a conserved novel catalytic activity-independent role of Tet as a scaffold protein in supporting niche signaling for adult stem cell self-renewal.

Indexed as

DioxygenasesDrosophila melanogasterDrosophila ProteinsAnimalsCell DifferentiationDrosophilaFemaleGerm CellsHumansStem Cell NicheStem CellsDioxygenasesdpp protein, DrosophilaDrosophila ProteinsGermline Stem CellsJak-Stat SignalingSelf-renewal and DifferentiationStem Cell NicheTet

Identifiers

PMID38499787
PMCPMC11021519
OpenAlexW4392907849

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.