Evidence map›Paper›PMID 38501302›Full record

ArticleImmunology2024

Single-cell transcriptomic and T cell antigen receptor analysis of human cytomegalovirus (hCMV)-specific memory T cells reveals effectors and pre-effectors of CD8

Raunak Kar, Somdeb Chattopadhyay, Anjali Sharma, Kirti Sharma, Shreya Sinha, Gopalakrishnan Aneeshkumar Arimbasseri, Veena S Patil

Open access · bronzeAbstract read
In one paragraph

Article in Immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Cytotoxic CD4Signal transduction and targeted therapy · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Raunak KarImmunogenomics Lab, National Institute of Immunology, New Delhi, Delhi, India.ORCID 0000-0003-1971-5682
Somdeb ChattopadhyayImmunogenomics Lab, National Institute of Immunology, New Delhi, Delhi, India.
Anjali SharmaDepartment of Transfusion Medicine and Blood Bank, Vardhman Mahavir Medical College and Safdarjung Hospital, New Delhi, Delhi, India.
Kirti SharmaImmunogenomics Lab, National Institute of Immunology, New Delhi, Delhi, India.
Shreya SinhaImmunogenomics Lab, National Institute of Immunology, New Delhi, Delhi, India.
Gopalakrishnan Aneeshkumar ArimbasseriMolecular Genetics Lab, National Institute of Immunology, New Delhi, Delhi, India.ORCID 0000-0001-5266-2688
Veena S PatilImmunogenomics Lab, National Institute of Immunology, New Delhi, Delhi, India.ORCID 0000-0003-3226-0002
National Institute of Immunology · INVardhman Mahavir Medical College & Safdarjung Hospital · IN

Funding

DBT-NIIDBT-Wellcome Trust India Alliance IA/I/18/2/504012DBT/Wellcome Trust India Alliance Fellowship IA/I/18/2/504012Department of Biotechnology-Junior Research Fellowship DBT/JRF/BET-19/I/2019/AL/89Wellcome Trust
6 · The paper itself

Abstract

Latent human cytomegalovirus (hCMV) infection can pose a serious threat of reactivation and disease occurrence in immune-compromised individuals. Although T cells are at the core of the protective immune response to hCMV infection, a detailed characterization of different T cell subsets involved in hCMV immunity is lacking. Here, in an unbiased manner, we characterized over 8000 hCMV-reactive peripheral memory T cells isolated from seropositive human donors, at a single-cell resolution by analysing their single-cell transcriptomes paired with the T cell antigen receptor (TCR) repertoires. The hCMV-reactive T cells were highly heterogeneous and consisted of different developmental and functional memory T cell subsets such as, long-term memory precursors and effectors, T helper-17, T regulatory cells (T

Indexed as

CD8-Positive T-LymphocytesCytomegalovirusCytomegalovirus InfectionsMemory T CellsReceptors, Antigen, T-CellSingle-Cell AnalysisT-Lymphocytes, CytotoxicTranscriptomeCD4-Positive T-LymphocytesGene Expression ProfilingHumansImmunologic MemoryReceptors, Antigen, T-Cellantigen‐specific T cellsCD4‐CTLsCD8‐CTLshCMVsingle‐cell RNA‐Seqsingle‐cell TCR‐SeqTCRTREGs

Identifiers

PMID38501302
PMCPMC7616077
OpenAlexW4392958436

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.