Evidence map›Paper›PMID 38508190›Full record

ArticleStructure (London, England : 1993)2024

DNAJB8 oligomerization is mediated by an aromatic-rich motif that is dispensable for substrate activity.

Bryan D Ryder, Elizaveta Ustyantseva, David R Boyer, Ayde Mendoza-Oliva, Mikołaj I Kuska, Paweł M Wydorski, Paulina Macierzyńska, Nabil Morgan, Michael R Sawaya, Marc I Diamond and 2 more

Open access · greenAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. DNAJB6: A guardian against neurodegeneration.Neural regeneration research · 2026
    Article
  2. Chiral inversion mutagenesis identifies geometrically constrained residues within self-associating low-complexity domains.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Mechanisms and regulation of the Hsp70 chaperone network.Nature reviews. Molecular cell biology · 2026
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Bryan D RyderCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Elizaveta UstyantsevaDepartment of Biomedical Sciences of Cells & Systems, University Medical Center Groningen, University of Groningen, Groningen 9713 AV, The Netherlands.
David R BoyerMolecular Biology Institute, University of California Los Angeles, Los Angeles, CA 90095, USA.
Ayde Mendoza-OlivaCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Mikołaj I KuskaCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Paweł M WydorskiCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Paulina MacierzyńskaCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Nabil MorganCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Michael R SawayaMolecular Biology Institute, University of California Los Angeles, Los Angeles, CA 90095, USA.
Marc I DiamondCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Harm H KampingaDepartment of Biomedical Sciences of Cells & Systems, University Medical Center Groningen, University of Groningen, Groningen 9713 AV, The Netherlands.
Lukasz A JoachimiakCenter for Alzheimer's and Neurodegenerative Diseases, Peter O'Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: lukasz.joachimiak@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USUniversity Medical Center Groningen · NLUniversity of California, Los Angeles · USSouthwestern Medical Center · US

Funding

Y-FAMILY POLYMERASES AND CO-FACTORS IN TRANSLESION REPLICATIONP41RR015301 · NCRR · CORNELL UNIVERSITY ITHACA · PI HARRISON, STEPHEN COPLAN · 2001 to 2011
$28.2M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Seeds and Strains Derived from Tau Monomer - Perez Diversity SupplementRF1AG065407 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI DIAMOND, MARC I, JOACHIMIAK, LUKASZ A. · 2020 to 2021
$3.2M
Structural profiling of tauopathy seedsRF1AG076459 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI JOACHIMIAK, LUKASZ A. · 2023 to 2023
$1.2M
J-domain protein conformational selectivity for tau in diseaseRF1AG078888 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI JOACHIMIAK, LUKASZ A. · 2022 to 2022
$1.2M
Seeds and Strains Derived from Tau MonomerR01AG065407 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI DIAMOND, MARC I, JOACHIMIAK, LUKASZ A. · 2024 to 2024
$767k
TEM for UT Southwestern Electron Microscopy Core FacilityS10OD021685 · OD · UT SOUTHWESTERN MEDICAL CENTER · PI LUBY-PHELPS, KATHERINE J · 2017 to 2017
$398k
SEM for UT Southwestern EM Core FacilityS10OD020103 · OD · UT SOUTHWESTERN MEDICAL CENTER · PI LUBY-PHELPS, KATHERINE J · 2015 to 2015
$306k
NCRR NIH HHS P41 RR015301NIA NIH HHS R01 AG065407NIA NIH HHS RF1 AG065407NIA NIH HHS RF1 AG076459NIA NIH HHS RF1 AG078888NIGMS NIH HHS P41 GM103403NIH HHS S10 OD020103NIH HHS S10 OD021685
6 · The paper itself

Abstract

J-domain protein (JDP) molecular chaperones have emerged as central players that maintain a healthy proteome. The diverse members of the JDP family function as monomers/dimers and a small subset assemble into micron-sized oligomers. The oligomeric JDP members have eluded structural characterization due to their low-complexity, intrinsically disordered middle domains. This in turn, obscures the biological significance of these larger oligomers in protein folding processes. Here, we identified a short, aromatic motif within DNAJB8 that drives self-assembly through π-π stacking and determined its X-ray structure. We show that mutations in the motif disrupt DNAJB8 oligomerization in vitro and in cells. DNAJB8 variants that are unable to assemble bind to misfolded tau seeds more specifically and retain capacity to reduce protein aggregation in vitro and in cells. We propose a new model for DNAJB8 function in which the sequences in the low-complexity domains play distinct roles in assembly and substrate activity.

Indexed as

HSP40 Heat-Shock ProteinsProtein MultimerizationAmino Acid MotifsCrystallography, X-RayHumansModels, MolecularMolecular ChaperonesMutationNerve Tissue ProteinsProtein BindingProtein Foldingtau ProteinsDNAJB8 protein, humanHSP40 Heat-Shock ProteinsMolecular ChaperonesNerve Tissue Proteinstau ProteinsAlzheimer‘s diseasechaperoneDNAJB6DNAJB8J-domain proteinsLARKSneurodegenerationpolyQproteostasistau

Identifiers

PMID38508190
PMCPMC11162344
OpenAlexW4392950817

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.