Evidence map›Paper›PMID 38511533›Full record

ArticleProtein science : a publication of the Protein Society2024

Liquid-liquid phase separation of α-synuclein is highly sensitive to sequence complexity.

Anindita Mahapatra, Robert W Newberry

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  7. Liquid-liquid phase separation of α-synuclein is highly sensitive to sequence complexity.Protein science : a publication of the Protein Society · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Anindita MahapatraDepartment of Chemistry, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-1932-0851
Robert W NewberryDepartment of Chemistry, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-2020-2641

Funding

Biophysical Determinants of Physiological and Pathological alpha-Synuclein Membrane InteractionsR00NS116679 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI NEWBERRY, ROBERT WILLIAM · 2022 to 2024
$740k
Biophysical Determinants of Physiological and Pathological alpha-Synuclein Membrane InteractionsK99NS116679 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NEWBERRY, ROBERT WILLIAM · 2021 to 2022
$200k
NINDS NIH HHS K99 NS116679NINDS NIH HHS R00 NS116679NINDS NIH HHS R00-NS116679
6 · The paper itself

Abstract

The Parkinson's-associated protein α-synuclein (α-syn) can undergo liquid-liquid phase separation (LLPS), which typically leads to the formation of amyloid fibrils. The coincidence of LLPS and amyloid formation has complicated the identification of the molecular determinants unique to LLPS of α-syn. Moreover, the lack of strategies to selectively perturb LLPS makes it difficult to dissect the biological roles specific to α-syn LLPS, independent of fibrillation. Herein, using a combination of subtle missense mutations, we show that LLPS of α-syn is highly sensitive to its sequence complexity. In fact, we find that even a highly conservative mutation (V16I) that increases sequence complexity without perturbing physicochemical and structural properties, is sufficient to reduce LLPS by 75%; this effect can be reversed by an adjacent V-to-I mutation (V15I) that restores the original sequence complexity. A18T, a complexity-enhancing PD-associated mutation, was likewise found to reduce LLPS, implicating sequence complexity in α-syn pathogenicity. Furthermore, leveraging the differences in LLPS propensities among different α-syn variants, we demonstrate that fibrillation of α-syn does not necessarily correlate with its LLPS. In fact, we identify mutations that selectively perturb LLPS or fibrillation of α-syn, unlike previously studied mutations. The variants and design principles reported herein should therefore empower future studies to disentangle these two phenomena and distinguish their (patho)biological roles.

Indexed as

alpha-SynucleinParkinson DiseaseAmyloidHumansMutationMutation, MissensePhase Separationalpha-SynucleinAmyloidaggregationalpha‐synucleinphase separationsequence complexity

Identifiers

PMID38511533
PMCPMC10955625

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.