Evidence map›Paper›PMID 38528203›Full record

ArticleNature neuroscience2024

Spatial enhancer activation influences inhibitory neuron identity during mouse embryonic development.

Elena Dvoretskova, May C Ho, Volker Kittke, Florian Neuhaus, Ilaria Vitali, Daniel D Lam, Irene Delgado, Chao Feng, Miguel Torres, Juliane Winkelmann and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Nature neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Resolving cell lineages and gene functions in the developing mouse gastrointestinal tract using in utero transduction.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Probing neuropsychiatric disorders through in vivo CRISPR screening.Current opinion in genetics & development · 2026
    Review
  11. Article
  12. Article
  13. Functional Neurogenomics to Dissect Disease Mechanisms Across Models.Annual review of genomics and human genetics · 2025
    Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Elena Dvoretskova *Max Planck Institute for Biological Intelligence, Martinsried, Germany.ORCID http://orcid.org/0000-0001-9334-386X
May C Ho *Max Planck Institute for Biological Intelligence, Martinsried, Germany.
Volker Kittke *Institute of Neurogenomics, Helmholtz Zentrum München GmbH, German Research Center for Environmental Health, Neuhererg, Germany.ORCID http://orcid.org/0000-0001-8866-1388
Florian NeuhausMax Planck Institute for Biological Intelligence, Martinsried, Germany.
Ilaria VitaliMax Planck Institute for Biological Intelligence, Martinsried, Germany.ORCID http://orcid.org/0000-0001-9536-0292
Daniel D LamInstitute of Neurogenomics, Helmholtz Zentrum München GmbH, German Research Center for Environmental Health, Neuhererg, Germany.
Irene DelgadoCardiovascular Development Program, Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain.ORCID http://orcid.org/0000-0002-0493-8261
Chao FengMax Planck Institute for Biological Intelligence, Martinsried, Germany.
Miguel TorresCardiovascular Development Program, Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain.ORCID http://orcid.org/0000-0003-0906-4767
Juliane WinkelmannInstitute of Neurogenomics, Helmholtz Zentrum München GmbH, German Research Center for Environmental Health, Neuhererg, Germany.ORCID http://orcid.org/0000-0002-3074-599X
Christian MayerMax Planck Institute for Biological Intelligence, Martinsried, Germany. christian.mayer@bi.mpg.de.ORCID http://orcid.org/0000-0003-3152-5574
Max Planck Institute of Neurobiology · DEHelmholtz Zentrum München · DESpanish National Centre for Cardiovascular Research · ESUniversidad Complutense de Madrid · ES

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 01EW1605EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 803984EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) ERC-2018-STG
6 · The paper itself

Abstract

The mammalian telencephalon contains distinct GABAergic projection neuron and interneuron types, originating in the germinal zone of the embryonic basal ganglia. How genetic information in the germinal zone determines cell types is unclear. Here we use a combination of in vivo CRISPR perturbation, lineage tracing and ChIP-sequencing analyses and show that the transcription factor MEIS2 favors the development of projection neurons by binding enhancer regions in projection-neuron-specific genes during mouse embryonic development. MEIS2 requires the presence of the homeodomain transcription factor DLX5 to direct its functional activity toward the appropriate binding sites. In interneuron precursors, the transcription factor LHX6 represses the MEIS2-DLX5-dependent activation of projection-neuron-specific enhancers. Mutations of Meis2 result in decreased activation of regulatory enhancers, affecting GABAergic differentiation. We propose a differential binding model where the binding of transcription factors at cis-regulatory elements determines differential gene expression programs regulating cell fate specification in the mouse ganglionic eminence.

Indexed as

Embryonic DevelopmentEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalHomeodomain ProteinsTranscription FactorsAnimalsCell DifferentiationGABAergic NeuronsInterneuronsLIM-Homeodomain ProteinsMiceNerve Tissue ProteinsNeurogenesisHomeodomain ProteinsLHX6 protein, mouseLIM-Homeodomain ProteinsNerve Tissue ProteinsTranscription Factors

Identifiers

PMID38528203
PMCPMC11088997
OpenAlexW4393153137

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.