Evidence map›Paper›PMID 38537616›Full record

ArticlePlant physiology2024

Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes.

Keting Chen, Liza E Alexander, Umnia Mahgoub, Yozo Okazaki, Yasuhiro Higashi, Ann M Perera, Lucas J Showman, Derek Loneman, Tesia S Dennison, Miriam Lopez and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Development of phytochemical genomics: From decoding metabolome to functional genomics and biotechnology of plant metabolism.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Keting ChenDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-5242-7239
Liza E AlexanderRoy J. Carver Department of Biochemistry, Biophysics & Molecular Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-5244-8259
Umnia MahgoubDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-8482-8504
Yozo OkazakiMetabolomics Research Group, RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa 230-0045, Japan.
Yasuhiro HigashiMetabolomics Research Group, RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa 230-0045, Japan.ORCID 0000-0003-0784-7960
Ann M PereraW.M. Keck Metabolomics Research Laboratory, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0001-8216-0742
Lucas J ShowmanW.M. Keck Metabolomics Research Laboratory, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-8308-5251
Derek LonemanDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0009-0005-6810-2550
Tesia S DennisonDepartment of Plant Pathology & Microbiology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0003-4045-1175
Miriam LopezCorn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA 50011, USA.ORCID 0000-0002-9030-6892
Reid ClaussenDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.
Layton PeddicordDepartment of Plant Pathology & Microbiology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0003-4784-756X
Kazuki SaitoMetabolomics Research Group, RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa 230-0045, Japan.ORCID 0000-0001-6310-5342
Nick LauterDepartment of Plant Pathology & Microbiology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-3127-8609
Karin S DormanDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0003-3650-0018
Basil J NikolauBioinformatics & Computational Biology Graduate Program, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-4672-7139
Marna D Yandeau-NelsonDepartment of Genetics, Development & Cell Biology, Iowa State University, Ames, IA 50011, USA.ORCID 0000-0002-2742-7384
Iowa State University · USAgricultural Research Service · USRIKEN Center for Sustainable Resource Science · JPMie University · JP

Funding

Iowa Agriculture and Home Economics Research Station Project IOW03649Iowa State University's Center for Metabolic BiologyNational Institute of Food and Agriculture IOW03617National Science Foundation IOS-1354799United States Department of Agriculture 5030 21000-067-00D
6 · The paper itself

Abstract

The hydrophobic cuticle is the first line of defense between aerial portions of plants and the external environment. On maize (Zea mays L.) silks, the cuticular cutin matrix is infused with cuticular waxes, consisting of a homologous series of very long-chain fatty acids (VLCFAs), aldehydes, and hydrocarbons. Together with VLC fatty-acyl-CoAs (VLCFA-CoAs), these metabolites serve as precursors, intermediates, and end-products of the cuticular wax biosynthetic pathway. To deconvolute the potentially confounding impacts of the change in silk microenvironment and silk development on this pathway, we profiled cuticular waxes on the silks of the inbreds B73 and Mo17, and their reciprocal hybrids. Multivariate interrogation of these metabolite abundance data demonstrates that VLCFA-CoAs and total free VLCFAs are positively correlated with the cuticular wax metabolome, and this metabolome is primarily affected by changes in the silk microenvironment and plant genotype. Moreover, the genotype effect on the pathway explains the increased accumulation of cuticular hydrocarbons with a concomitant reduction in cuticular VLCFA accumulation on B73 silks, suggesting that the conversion of VLCFA-CoAs to hydrocarbons is more effective in B73 than Mo17. Statistical modeling of the ratios between cuticular hydrocarbons and cuticular VLCFAs reveals a significant role of precursor chain length in determining this ratio. This study establishes the complexity of the product-precursor relationships within the silk cuticular wax-producing network by dissecting both the impact of genotype and the allocation of VLCFA-CoA precursors to different biological processes and demonstrates that longer chain VLCFA-CoAs are preferentially utilized for hydrocarbon biosynthesis.

Indexed as

Fatty AcidsHydrocarbonsWaxesZea maysBiosynthetic PathwaysGenotypeMetabolomePlant EpidermisFatty AcidsHydrocarbonsWaxes

Identifiers

PMID38537616
PMCPMC11213258
OpenAlexW4393215786

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.