Evidence map›Paper›PMID 38538340›Full record

ReviewFrontiers in bioscience (Scholar edition)2024

Decoding Non-coding Variants: Recent Approaches to Studying Their Role in Gene Regulation and Human Diseases.

Edwin G Peña-Martínez, José A Rodríguez-Martínez

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in bioscience (Scholar edition), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Article
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  4. Review
  5. Article
  6. Review
  7. A 20 Bp Indel ofAnimals : an open access journal from MDPI · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. How Genomic and Structural Context Could Shape JAK-STAT Variant Pathogenicity.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2026
    Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
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  20. Local Climate Adaptation in Chinese Indigenous Pig Genomes.Animals : an open access journal from MDPI · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Edwin G Peña-MartínezDepartment of Biology, University of Puerto Rico-Río Piedras, 00931 San Juan, Puerto Rico.
José A Rodríguez-MartínezDepartment of Biology, University of Puerto Rico-Río Piedras, 00931 San Juan, Puerto Rico.
University of Puerto Rico at Río Piedras · PR

Funding

Upgrade Laboratories Facilities at UPR-Rio PiedrasR25GM061151 · NIGMS · UNIVERSITY OF PUERTO RICO RIO PIEDRAS · PI CARBALLEIRA, NESTOR MANUEL · 2001 to 2023
$32.5M
Uncovering the DNA recognition rules of cardiac transcription factorsSC1GM127231 · NIGMS · UNIVERSITY OF PUERTO RICO RIO PIEDRAS · PI RODRIGUEZ-MARTINEZ, JOSE A · 2018 to 2021
$1.4M
NIGMS NIH HHS R25 GM061151NIGMS NIH HHS SC1 GM127231
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have mapped over 90% of disease- and quantitative-trait-associated variants within the non-coding genome. Non-coding regulatory DNA (e.g., promoters and enhancers) and RNA (e.g., 5' and 3' UTRs and splice sites) are essential in regulating temporal and tissue-specific gene expressions. Non-coding variants can potentially impact the phenotype of an organism by altering the molecular recognition of the

Indexed as

Gene Expression RegulationGenome-Wide Association StudyHumansPolymorphism, Single NucleotidePromoter Regions, GeneticProtein BindingRegulatory Sequences, Nucleic Acidgene regulationmassively parallel reporter assaynon-coding variantsRNA processingtranscription factors

Identifiers

PMID38538340
PMCPMC11044903
OpenAlexW4392354889

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.