Evidence map›Paper›PMID 38538720›Full record

ArticleHeredity2024

Plasticity of circadian and circatidal rhythms in activity and transcriptomic dynamics in a freshwater snail.

Takumi Yokomizo, Yuma Takahashi

Open access · hybridAbstract read
In one paragraph

Article in Heredity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. The Molecular Mechanism ofInternational journal of molecular sciences · 2025
    Article
  3. Review
  4. Evidence for ~12-h ultradian gene programs in humans.Npj biological timing and sleep · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Takumi YokomizoGraduate School of Science, Chiba University, Chiba, 263-8522, Japan.
Yuma TakahashiGraduate School of Science, Chiba University, Chiba, 263-8522, Japan. takahashi.yum@gmail.com.ORCID 0000-0003-1490-7837
Chiba University · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 17H03729MEXT | Japan Society for the Promotion of Science (JSPS) 20K06822MEXT | Japan Society for the Promotion of Science (JSPS) 21J20682
6 · The paper itself

Abstract

Organisms have diverse biological clocks synchronised with environmental cycles depending on their habitats. Anticipation of tidal changes has driven the evolution of circatidal rhythms in some marine species. In the freshwater snail, Semisulcospira reiniana, individuals in nontidal areas exhibit circadian rhythms, whereas those in tidal areas exhibit both circadian and circatidal rhythms. We investigated whether the circatidal rhythms are genetically determined or induced by environmental cycles. The exposure to a simulated tidal cycle did not change the intensity of circatidal rhythm in individuals in the nontidal population. However, snails in the tidal population showed different activity rhythms depending on the presence or absence of the exposure. Transcriptome analysis revealed that genes with circatidal oscillation increased due to entrainment to the tidal cycle in both populations and dominant rhythmicity was consistent with the environmental cycle. These results suggest plasticity in the endogenous rhythm in the gene expression in both populations. Note that circatidal oscillating genes were more abundant in the tidal population than in the nontidal population, suggesting that a greater number of genes are associated with circatidal clocks in the tidal population compared to the nontidal population. This increase of circatidal clock-controlled genes in the tidal population could be caused by genetic changes in the biological clock or the experience of tidal cycle in the early life stage. Our findings suggest that the plasticity of biological rhythms may have contributed to the adaptation to the tidal environment in S. reiniana.

Indexed as

Circadian RhythmFresh WaterSnailsTranscriptomeAnimalsBiological ClocksEcosystemGene Expression Profiling

Identifiers

PMID38538720
PMCPMC11074255
OpenAlexW4393226895

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.