Evidence map›Paper›PMID 38553608›Full record

ArticleNature microbiology2024

Phase transition of GvpU regulates gas vesicle clustering in bacteria.

Zongru Li, Qionghua Shen, Emery T Usher, Andrew P Anderson, Manuel Iburg, Richard Lin, Brandon Zimmer, Matthew D Meyer, Alex S Holehouse, Lingchong You and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Condenzymes: Biomolecular condensates with inherent catalytic activities.bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zongru LiDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0003-1918-9707
Qionghua ShenDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0002-2808-4408
Emery T UsherDepartment of Biomedical Engineering, Center for Biomolecular Condensates, Washington University in St. Louis, Saint Louis, MO, USA.ORCID http://orcid.org/0000-0002-8303-9992
Andrew P AndersonDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0009-0001-1469-3368
Manuel IburgDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0002-1073-9023
Richard LinDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0009-0009-3101-8258
Brandon ZimmerDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0009-0000-7201-9809
Matthew D MeyerShared Equipment Authority, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0002-0680-6123
Alex S HolehouseDepartment of Biomedical Engineering, Center for Biomolecular Condensates, Washington University in St. Louis, Saint Louis, MO, USA.ORCID http://orcid.org/0000-0002-4155-5729
Lingchong YouDepartment of Biomedical Engineering, Duke University, Durham, NC, USA. you@duke.edu.ORCID http://orcid.org/0000-0003-3725-4007
Ashutosh ChilkotiDepartment of Biomedical Engineering, Duke University, Durham, NC, USA. chilkoti@duke.edu.ORCID http://orcid.org/0000-0002-1569-2228
Yifan DaiDepartment of Biomedical Engineering, Center for Biomolecular Condensates, Washington University in St. Louis, Saint Louis, MO, USA. dyifan@wustl.edu.ORCID http://orcid.org/0000-0002-1009-5790
George J LuDepartment of Bioengineering, Rice University, Houston, TX, USA. george.lu@rice.edu.ORCID http://orcid.org/0000-0002-4689-9686

Funding

Intervention to Enhance Lateral Balance Function and Prevent Falls in AgingR01AG033607 · NIA · UNIVERSITY OF MARYLAND BALTIMORE · PI ROGERS, MARK W · 2010 to 2014
$2.0M
Sonomagnetic Imaging and Sonomechanical Control of Biological Processes in Deep TissuesR00EB024600 · NIBIB · RICE UNIVERSITY · PI LU, GEORGE J · 2020 to 2022
$744k
Ultrasensitive acoustic reporter proteins with engineered rupture-resistant shellsR21EB033607 · NIBIB · RICE UNIVERSITY · PI LU, GEORGE J · 2022 to 2024
$609k
Cancer Prevention and Research Institute of Texas (Cancer Prevention Research Institute of Texas) RR190081Deutsche Forschungsgemeinschaft (German Research Foundation) 511048568G. Harold and Leila Y. Mathers Foundation (G. Harold & Leila Y. Mathers Foundation) MF-2012-01314John S. Dunn Foundation N/ANIBIB NIH HHS R00 EB024600NIBIB NIH HHS R21 EB033607United States Department of Defense | United States Air Force | AFMC | Air Force Office of Scientific Research (AF Office of Scientific Research) FA9550-20-1-0241U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering (NIBIB) R21EB033607Welch Foundation C-2069-20210327
6 · The paper itself

Abstract

Gas vesicles (GVs) are microbial protein organelles that support cellular buoyancy. GV engineering has multiple applications, including reporter gene imaging, acoustic control and payload delivery. GVs often cluster into a honeycomb pattern to minimize occupancy of the cytosol. The underlying molecular mechanism and the influence on cellular physiology remain unknown. Using genetic, biochemical and imaging approaches, here we identify GvpU from Priestia megaterium as a protein that regulates GV clustering in vitro and upon expression in Escherichia coli. GvpU binds to the C-terminal tail of the core GV shell protein and undergoes a phase transition to form clusters in subsaturated solution. These properties of GvpU tune GV clustering and directly modulate bacterial fitness. GV variants can be designed with controllable sensitivity to GvpU-mediated clustering, enabling design of genetically tunable biosensors. Our findings elucidate the molecular mechanisms and functional roles of GV clustering, enabling its programmability for biomedical applications.

Indexed as

OrganellesProteinsBacteriaProteins

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.