Evidence map›Paper›PMID 38565896›Full record

ArticleNature microbiology2024

Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles.

Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Íñigo Lasa, José R Penadés

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Revisiting the life cycle of temperate phages.Nature reviews. Microbiology · 2026
    Review
  3. Article
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  5. Article
  6. Article
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  8. Frontiers in cellular and infection microbiology · 2026
    Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jakob T Rostøl *Centre for Bacterial Resistance Biology, Imperial College London, London, UK. j.rostoel@imperial.ac.uk.ORCID http://orcid.org/0000-0001-9485-9972
Nuria Quiles-Puchalt *Centre for Bacterial Resistance Biology, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-3101-1197
Pablo Iturbe-SanzLaboratory of Microbial Pathogenesis. Navarrabiomed, Hospital Universitario de Navarra (HUN), Universidad Pública de Navarra (UPNA), IdiSNA, Pamplona, Spain.
Íñigo LasaLaboratory of Microbial Pathogenesis. Navarrabiomed, Hospital Universitario de Navarra (HUN), Universidad Pública de Navarra (UPNA), IdiSNA, Pamplona, Spain.ORCID http://orcid.org/0000-0002-6625-9221
José R PenadésCentre for Bacterial Resistance Biology, Imperial College London, London, UK. j.penades@imperial.ac.uk.ORCID http://orcid.org/0000-0002-6439-5262
NIHR Imperial Biomedical Research Centre · GBUniversidad Publica de Navarra · ESUniversidad Cardenal Herrera CEU · ES

Funding

European Molecular Biology Organization (EMBO) ALTF 164-2021Medical Research Council MR/M003876/1Medical Research Council MR/S00940X/2Medical Research Council MR/X020223/1RCUK | Engineering and Physical Sciences Research Council (EPSRC) EP/X026671/1RCUK | Medical Research Council (MRC) MR/S00940X/1RCUK | Medical Research Council (MRC) MR/V000772/1
6 · The paper itself

Abstract

Dormant prophages protect lysogenic cells by expressing diverse immune systems, which must avoid targeting their cognate prophages upon activation. Here we report that multiple Staphylococcus aureus prophages encode Tha (tail-activated, HEPN (higher eukaryotes and prokaryotes nucleotide-binding) domain-containing anti-phage system), a defence system activated by structural tail proteins of incoming phages. We demonstrate the function of two Tha systems, Tha-1 and Tha-2, activated by distinct tail proteins. Interestingly, Tha systems can also block reproduction of the induced tha-positive prophages. To prevent autoimmunity after prophage induction, these systems are inhibited by the product of a small overlapping antisense gene previously believed to encode an excisionase. This genetic organization, conserved in S. aureus prophages, allows Tha systems to protect prophages and their bacterial hosts against phage predation and to be turned off during prophage induction, balancing immunity and autoimmunity. Our results show that the fine regulation of these processes is essential for the correct development of prophages' life cycle.

Indexed as

ProphagesStaphylococcus aureusAutoimmunityBacteriophagesLysogenyStaphylococcus PhagesViral Tail ProteinsViral Tail Proteins

Identifiers

PMID38565896
PMCPMC11087260
OpenAlexW4393396876

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.