Evidence map›Paper›PMID 38570596›Full record

ArticleScientific reports2024

The invasive land flatworm Arthurdendyus triangulatus has repeated sequences in the mitogenome, extra-long cox2 gene and paralogous nuclear rRNA clusters.

Romain Gastineau, Claude Lemieux, Monique Turmel, Christian Otis, Brian Boyle, Mathieu Coulis, Clément Gouraud, Brian Boag, Archie K Murchie, Leigh Winsor and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The complete mitochondrial genome of the shining leaf chaferMitochondrial DNA. Part B, Resources · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 6 countries.

Romain GastineauInstitute of Marine and Environmental Sciences, University of Szczecin, Szczecin, Poland. romain.gastineau@usz.edu.pl.
Claude LemieuxDépartement de Biochimie, de Microbiologie et de Bio-Informatique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Quebec, QC, Canada.
Monique TurmelDépartement de Biochimie, de Microbiologie et de Bio-Informatique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Quebec, QC, Canada.
Christian OtisPlateforme d'Analyse Génomique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Quebec, QC, Canada.
Brian BoylePlateforme d'Analyse Génomique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Quebec, QC, Canada.
Mathieu CoulisCIRAD, UPR GECO, 97285, Le Lamentin, Martinique, France.
Clément GouraudUMR CNRS 6553 Ecobio, Université de Rennes, 263 Avenue du Gal Leclerc, CS 74205, CEDEX, 35042, Rennes, France.
Brian BoagThe James Hutton Institute, Invergowrie, DD2 5DA, Scotland.
Archie K MurchieSustainable Agri-Food Sciences Division, Agri-Food and Biosciences Institute, Belfast, BT9 5PX, Northern Ireland.
Leigh WinsorCollege of Science and Engineering, James Cook University of North Queensland, Townsville, QLD, Australia.
Jean-Lou JustineISYEB, Institut de Systématique, Évolution, Biodiversité (UMR7205 CNRS, EPHE, MNHN, UPMC, Université des Antilles), Muséum National d'Histoire Naturelle, CP 51, 55 Rue Buffon, 75231, Paris Cedex 05, France.
Université Laval · CACentre Hospitalier Universitaire de Martinique · MQCentre National de la Recherche Scientifique · FRJames Cook University · AUJames Hutton Institute · GBSorbonne Université · FRUniversity of Szczecin · PL

Funding

Ministère de l'Économie, de l'Innovation et de l'Énergie Québec Programme d'appui aux plateformes technologiques stratégiquesMinisterstwo Edukacji i Nauki This work was co-financed by the Minister of Science under the "Regional Excellence Initiative" Program (2024-2027).Natural Sciences and Engineering Research Council of Canada RGPIN-2017-04506
6 · The paper itself

Abstract

Using a combination of short- and long-reads sequencing, we were able to sequence the complete mitochondrial genome of the invasive 'New Zealand flatworm' Arthurdendyus triangulatus (Geoplanidae, Rhynchodeminae, Caenoplanini) and its two complete paralogous nuclear rRNA gene clusters. The mitogenome has a total length of 20,309 bp and contains repetitions that includes two types of tandem-repeats that could not be solved by short-reads sequencing. We also sequenced for the first time the mitogenomes of four species of Caenoplana (Caenoplanini). A maximum likelihood phylogeny associated A. triangulatus with the other Caenoplanini but Parakontikia ventrolineata and Australopacifica atrata were rejected from the Caenoplanini and associated instead with the Rhynchodemini, with Platydemus manokwari. It was found that the mitogenomes of all species of the subfamily Rhynchodeminae share several unusual structural features, including a very long cox2 gene. This is the first time that the complete paralogous rRNA clusters, which differ in length, sequence and seemingly number of copies, were obtained for a Geoplanidae.

Indexed as

Genome, MitochondrialPlatyhelminthsAnimalsPhylogenyRepetitive Sequences, Nucleic AcidRNA, RibosomalSequence Analysis, DNARNA, RibosomalArthurdendyusInvasive flatwormMitogenomeParalogous rRNAShort- and long-reads sequencingTandem repeats

Identifiers

PMID38570596
PMCPMC10991399
OpenAlexW4393851233

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.