ArticleGenetics2024
WormBase 2024: status and transitioning to Alliance infrastructure.
Abstract read
In one paragraph
Article in Genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 226 papers.
0numbers the graph read from it
0cells of the map it votes in
226citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
226 citing papers in PubMed.
- Life-History, Stress-Resistance, and Transcriptomic Variation Among a MexicanEcology and evolution · 2026Article
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- Tagging of C. elegans apoptosis activator EGL-1 BH3-only reveals CED-9 BCL-2-dependent mitochondrial localization and dynamic control of EGL-1 synthesis and degradation in vivo.Cell death and differentiation · 2026Article
- SpotMAX: A generalist framework for multidimensional automatic spot detection and quantification.Science advances · 2026Article
- Chemosensory Pathways Involved in the Perception of Tomato-Derived Flavonoids and Alkaloids inPathogens (Basel, Switzerland) · 2026Article
- Opposing roles for lipocalins and a CD36 family scavenger receptor in apical extracellular matrix-dependent protection of narrow tube integrity.Development (Cambridge, England) · 2026Article
- A cytosolic IF1 reporter enables real-time visualization of severe mitochondrial membrane damage.The Journal of cell biology · 2026Article
- Repeated mutation of a GT92 glycosyltransferase gene confers antiviral resistance in two Caenorhabditis species.Molecular biology and evolution · 2026Article
- Cohesin and NuRD antagonistically drive alternative neuronal fates via PLZF transcription factors.Science advances · 2026Article
- A Lipocalin and a Hedgehog-related protein are partners in thebioRxiv : the preprint server for biology · 2026Article
- Multilevel transcriptional regulation of embryonic sex determination and dosage compensation by the X-signal element sex-1.Genetics · 2026Article
- Genome assemblies and annotations are not static and need support for tracking their evolution.Briefings in bioinformatics · 2026Review
- Environmental sex determination in the cyst nematode Globodera pallida defaults to male development.BMC biology · 2026Article
- A TCER-1-siRNA regulatory axis suppresses antibacterial innate immunity in C. elegans.PLoS pathogens · 2026Article
- Toxicological and Physiological Responses to Combined Ultrasound and Lipid-Coated ZnO Nanoparticle Exposure inACS applied materials & interfaces · 2026Article
- Apical spectrin organizes cortical actin filament bundles to pattern C. elegans cuticle ridges.PLoS genetics · 2026Article
- A conserved Arf-GEF modulates axonal integrity through RAB-35 by altering neuron-epidermal attachment.Journal of cell science · 2026Article
- Basal cytoplasmic calcium levels regulate C. elegans germ stem cell proliferation.Development (Cambridge, England) · 2026Article
- SPSP-1 is a sperm protein required for C. elegans hermaphrodite sperm production and embryogenesis.Biology open · 2026Article
166 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
31 authors.
Paul W SternbergDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0000-0002-7699-0173
Kimberly Van AukenDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Qinghua WangDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Adam WrightInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.ORCID 0000-0002-5719-4024
Karen YookDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Magdalena ZarowieckiEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Valerio ArnaboldiDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0000-0002-2563-5374
Andrés BecerraEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.ORCID 0000-0001-6038-3427
Stephanie BrownSchool of Infection and Immunity, University of Glasgow, Glasgow G12 8TA, UK.ORCID 0009-0000-2556-6439
Scott CainInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.
Juancarlos ChanDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Wen J ChenDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Jaehyoung ChoDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Paul DavisEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Stavros DiamantakisEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Sarah DyerEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Dionysis GrigoriadisSchool of Infection and Immunity, University of Glasgow, Glasgow G12 8TA, UK.
Christian A GroveDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Todd HarrisInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.ORCID 0000-0003-3406-163X
Kevin HoweEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Ranjana KishoreDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0000-0002-1478-7671
Raymond LeeDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Ian LongdenInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.
Manuel LuypaertEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.
Hans-Michael MüllerDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Paulo NuinInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.
Mark Quinton-TullochEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, UK.ORCID 0000-0001-5713-0736
Daniela RacitiDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Tim SchedlDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.
Gary SchindelmanDivision of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Lincoln SteinInformatics and Bio-computing Platform, Ontario Institute for Cancer Research, Toronto, ON M5G0A3, Canada.
Funding
Text mining in the CloudU24HG010859 · NHGRI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI CAROL J BULT, PAUL Warren STERNBERG · 2019 to 2026
$42.0MWormBase: a core data resource for C. elegans and other nematodesU24HG002223 · NHGRI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI TIM SCHEDL, PAUL Warren STERNBERG · 2018 to 2026
$18.9MGene Ontology Consortium and KnowledgebaseU24HG012212 · NHGRI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHRISTOPHER J MUNGALL, PAUL Warren STERNBERG · 2022 to 2026
$11.6MCuration at scale: Integrating AI into community curationR01LM013871 · NLM · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STERNBERG, PAUL WARREN · 2021 to 2024
$1.4MNHGRI NIH HHS U24 HG002223NHGRI NIH HHS U24HG002223NHGRI NIH HHS U24 HG010859NHGRI NIH HHS U24 HG012212NLM NIH HHS R01 LM013871NLM NIH HHS R01LM013871
Abstract
WormBase has been the major repository and knowledgebase of information about the genome and genetics of Caenorhabditis elegans and other nematodes of experimental interest for over 2 decades. We have 3 goals: to keep current with the fast-paced C. elegans research, to provide better integration with other resources, and to be sustainable. Here, we discuss the current state of WormBase as well as progress and plans for moving core WormBase infrastructure to the Alliance of Genome Resources (the Alliance). As an Alliance member, WormBase will continue to interact with the C. elegans community, develop new features as needed, and curate key information from the literature and large-scale projects.
Indexed as
Caenorhabditis elegansAnimalsDatabases, GeneticGenome, HelminthGenomicsbioinformatics toolsCaenorhabditis elegansdisease modelsgenome annotationGlobal Core Biodata Resourcesknowledgebasemodel organismsoftware
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What Socratic holds
Textmetadata
LicenceCC BY
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.