Evidence map›Paper›PMID 38594917›Full record

ArticleCPT: pharmacometrics & systems pharmacology2024

Construction of a prognostic model based on memory CD4+ T cell-associated genes for lung adenocarcinoma and its applications in immunotherapy.

Yong Li, Xiangli Ye, Huiqin Huang, Rongxiang Cao, Feijian Huang, Limin Chen

Abstract read
In one paragraph

Article in CPT: pharmacometrics & systems pharmacology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yong LiPulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou, China.
Xiangli YePulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou, China.
Huiqin HuangFujian Provincial Key Laboratory of Medical Testing, Fujian Academy of Medical Sciences, Fuzhou, China.
Rongxiang CaoPulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou, China.
Feijian HuangPulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou, China.
Limin ChenPulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou, China.

Funding

Joint Funds for the Innovation of Science and Technology, Fujian ProvinceNatural Science Foundation of Fujian Province
6 · The paper itself

Abstract

The association between memory CD4+ T cells and cancer prognosis is increasingly recognized, but their impact on lung adenocarcinoma (LUAD) prognosis remains unclear. In this study, using the cell-type identification by estimating relative subsets of RNA transcripts algorithm, we analyzed immune cell composition and patient survival in LUAD. Weighted gene coexpression network analysis helped identify memory CD4+ T cell-associated gene modules. Combined with module genes, a five-gene LUAD prognostic risk model (HOXB7, MELTF, ABCC2, GNPNAT1, and LDHA) was constructed by regression analysis. The model was validated using the GSE31210 data set. The validation results demonstrated excellent predictive performance of the risk scoring model. Correlation analysis was conducted between the clinical information and risk scores of LUAD samples, revealing that LUAD patients with disease progression exhibited higher risk scores. Furthermore, univariate and multivariate regression analyses demonstrated the model independent prognostic capability. The constructed nomogram results demonstrated that the predictive performance of the nomogram was superior to the prognostic model and outperformed individual clinical factors. Immune landscape assessment was performed to compare different risk score groups. The results revealed a better prognosis in the low-risk group with higher immune infiltration. The low-risk group also showed potential benefits from immunotherapy. Our study proposes a memory CD4+ T cell-associated gene risk model as a reliable prognostic biomarker for personalized treatment in LUAD patients.

Indexed as

Adenocarcinoma of LungCD4-Positive T-LymphocytesImmunotherapyLung NeoplasmsBiomarkers, TumorFemaleGene Expression Regulation, NeoplasticHumansMaleMemory T CellsMultidrug Resistance-Associated Protein 2NomogramsPrognosisABCC2 protein, humanBiomarkers, TumorMultidrug Resistance-Associated Protein 2

Identifiers

PMID38594917
PMCPMC11098152

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.