Evidence map›Paper›PMID 38601693›Full record

ArticleHeliyon2024

Identification of ferroptosis-associated genes and potential pharmacological targets in sepsis-induced myopathy.

Dongfang Wang, Ligang Xu, Yukun Liu, Chuntao Wang, Zhikai Xu, Fan Yang, Zhanfei Li, Xiangjun Bai, Yiliu Liao, Xiangping Liu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Dongfang WangDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Ligang XuDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Yukun LiuDepartment of Plastic and Cosmetic Surgery, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China.
Chuntao WangDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Zhikai XuDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Fan YangDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Zhanfei LiDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Xiangjun BaiDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Yiliu LiaoDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Xiangping LiuDepartment of Emergency and Critical Care Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China.
Yuchang WangDivision of Trauma Surgery, Emergency Surgery & Surgical Critical, Tongji Trauma Center, China.
Orthopaedic Trauma Association · USTongji Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The role of Ferroptosis in the course of sepsis-induced myopathy is yet unclear. The objective of our work is to identify key genes connected with Ferroptosis in sepsis-induced myopathy and investigate possible pharmaceutical targets related to this process. This research aims to provide new insights into the management of sepsis-induced myopathy. Methods: We got the GSE13205 dataset from the Gene Expression Omnibus (GEO) and extracted Ferroptosis-associated genes from the FerrDb database. After conducting a functional annotation analysis of these genes, we created a protein-protein interaction network using Cytoscape software to identify important genes. Subsequently, we employed CMap to investigate prospective pharmaceuticals that could target these crucial genes. Results: A total of 61 genes that are expressed differently (DEGs) have been found concerning Ferroptosis. These genes are involved in a wide range of biological functions, including reacting to signals from outside the cell and the availability of nutrients, programmed cell death, controlling apoptosis, and responding to peptides, chemical stressors, and hormones. The KEGG pathway study revealed that these pathways are involved in Ferroptosis, autophagy, P53 signaling, PI3K-Akt signaling, mTOR signaling, HIF-1 signaling, endocrine resistance, and different tumorigenic processes. In addition, we created a network that shows the simultaneous expression of important genes and determined the top 10 medications that have the potential to treat sepsis-induced myopathy. Conclusion: The bioinformatics research undertaken sheds insight into the probable role of Ferroptosis-associated genes in sepsis-induced myopathy. The identified critical genes show potential as therapeutic targets for treating sepsis-induced myopathy, offering opportunities for the development of tailored medicines.

Indexed as

Drug-gene predictionEnrichment analysisFerroptosisSepsisSepsis-induced myopathy

Identifiers

PMID38601693
PMCPMC11004882
OpenAlexW4393346671

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.