Evidence map›Paper›PMID 38626319›Full record

ArticleGenetics2024

Identification of factors limiting the allotopic production of the Cox2 subunit of yeast cytochrome c oxidase.

Felipe Nieto-Panqueva, Miriam Vázquez-Acevedo, Patrice P Hamel, Diego González-Halphen

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Felipe Nieto-PanquevaDepartamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Apartado Postal 70-243, 04510 D.F. (Mexico), México.ORCID 0000-0001-6196-854X
Miriam Vázquez-AcevedoDepartamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Apartado Postal 70-243, 04510 D.F. (Mexico), México.
Patrice P HamelDepartment of Molecular Genetics and Department of Biological Chemistry and Pharmacology, The Ohio State University, 582 Aronoff laboratory, 318 W. 12th Avenue, Columbus, OH 43210, USA.ORCID 0000-0002-7351-6230
Diego González-HalphenDepartamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Apartado Postal 70-243, 04510 D.F. (Mexico), México.ORCID 0000-0003-0654-655X
Universidad Nacional Autónoma de México · MXThe Ohio State University · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
CONACyT IN207023DGAPAFrontiers of ScienceNIGMS NIH HHS P41 GM103311NIH HHS P41-GM103311PAPIITUNAM CVU 700670
6 · The paper itself

Abstract

Mitochondrial genes can be artificially relocalized in the nuclear genome in a process known as allotopic expression, such is the case of the mitochondrial cox2 gene, encoding subunit II of cytochrome c oxidase (CcO). In yeast, cox2 can be allotopically expressed and is able to restore respiratory growth of a cox2-null mutant if the Cox2 subunit carries the W56R substitution within the first transmembrane stretch. However, the COX2W56R strain exhibits reduced growth rates and lower steady-state CcO levels when compared to wild-type yeast. Here, we investigated the impact of overexpressing selected candidate genes predicted to enhance internalization of the allotopic Cox2W56R precursor into mitochondria. The overproduction of Cox20, Oxa1, and Pse1 facilitated Cox2W56R precursor internalization, improving the respiratory growth of the COX2W56R strain. Overproducing TIM22 components had a limited effect on Cox2W56R import, while overproducing TIM23-related components showed a negative effect. We further explored the role of the Mgr2 subunit within the TIM23 translocator in the import process by deleting and overexpressing the MGR2 gene. Our findings indicate that Mgr2 is instrumental in modulating the TIM23 translocon to correctly sort Cox2W56R. We propose a biogenesis pathway followed by the allotopically produced Cox2 subunit based on the participation of the 2 different structural/functional forms of the TIM23 translocon, TIM23MOTOR and TIM23SORT, that must follow a concerted and sequential mode of action to insert Cox2W56R into the inner mitochondrial membrane in the correct Nout-Cout topology.

Indexed as

Electron Transport Complex IVMitochondriaSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsMitochondrial Precursor Protein Import Complex ProteinsProtein Transportcytochrome C oxidase subunit IIElectron Transport Complex IVMitochondrial Precursor Protein Import Complex ProteinsSaccharomyces cerevisiae ProteinsTIM23 protein, S cerevisiaeallotopic expressionCox2Mgr2 proteinprotein import into mitochondriasubunit II of cytochrome c oxidaseTIM23MOTORTIM23SORTTIM23 translocator

Identifiers

PMID38626319
PMCPMC11492495
OpenAlexW4394840809

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.