Evidence map›Paper›PMID 38628364›Full record

ArticleFrontiers in plant science2024

Integrated transcriptomics and metabolomics analyses of the effects of bagging treatment on carotenoid biosynthesis and regulation of

Xin Zheng, Liyun Huang, Benyi Fan, Chunlin Peng, Amjad Iqbal, Yujie Zhang, Hongman Chen, Jianqiu Ye, Yaodong Yang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Xin Zheng *Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Liyun Huang *Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Benyi FanCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Chunlin PengCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Amjad IqbalCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Yujie ZhangCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Hongman ChenPlanting Research Section, Hainan Agriculture School, Haikou, China.
Jianqiu YeCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Yaodong YangCoconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang, China.
Chinese Academy of Tropical Agricultural Sciences · CNCoconut Research Institute · CNAbdul Wali Khan University Mardan · PKHainan Agricultural School · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Fresh Aareca nut fruit for fresh fruit chewing commonly found in green or dark green hues. Despite its economic significance, there is currently insufficient research on the study of color and luster of areca. And the areca nut fruits after bagging showed obvious color change from green to tender yellow. In the study, we tried to explain this interesting variation in exocarp color. Methods: Fruits were bagged (with a double-layered black interior and yellow exterior) 45 days after pollination and subsequently harvested 120 days after pollination. In this study, we examined the the chlorophyll and carotenoid content of pericarp exocarp, integrated transcriptomics and metabolomics to study the effects of bagging on the carotenoid pathway at the molecular level. Results: It was found that the chlorophyll and carotenoid content of bagged areca nut (YP) exocarp was significantly reduced. A total of 21 differentially expressed metabolites (DEMs) and 1784 differentially expressed genes (DEGs) were screened by transcriptomics and metabolomics. Three key genes in the carotenoid biosynthesis pathway as candidate genes for qPCR validation by co-analysis, which suggested their role in the regulation of pathways related to Discussion: We described that light intensity may appear as a main factor influencing the noted shift from green to yellow and the ensuing reduction in carotenoid content after bagging.

Indexed as

Areca catechu L.baggingcarotenoidmetabolomicstranscriptomics

Identifiers

PMID38628364
PMCPMC11018958
OpenAlexW4393442326

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.