Evidence map›Paper›PMID 38629084›Full record

ArticlePlant phenomics (Washington, D.C.)2024

In Situ Root Dataset Expansion Strategy Based on an Improved CycleGAN Generator.

Qiushi Yu, Nan Wang, Hui Tang, JiaXi Zhang, Rui Xu, Liantao Liu

Abstract read
In one paragraph

Article in Plant phenomics (Washington, D.C.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Qiushi YuCollege of Mechanical and Electrical Engineering, Hebei Agricultural University, 071000 Baoding, China.
Nan WangCollege of Mechanical and Electrical Engineering, Hebei Agricultural University, 071000 Baoding, China.
Hui TangCollege of Mechanical and Electrical Engineering, Hebei Agricultural University, 071000 Baoding, China.
JiaXi ZhangCollege of Mechanical and Electrical Engineering, Hebei Agricultural University, 071000 Baoding, China.
Rui XuCollege of Foreign Languages, Hebei Agricultural University, 071000 Baoding, China.
Liantao LiuCollege of Agronomy, Hebei Agricultural University, 071000 Baoding, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The root system plays a vital role in plants' ability to absorb water and nutrients. In situ root research offers an intuitive approach to exploring root phenotypes and their dynamics. Deep-learning-based root segmentation methods have gained popularity, but they require large labeled datasets for training. This paper presents an expansion method for in situ root datasets using an improved CycleGAN generator. In addition, spatial-coordinate-based target background separation method is proposed, which solves the issue of background pixel variations caused by generator errors. Compared to traditional threshold segmentation methods, this approach demonstrates superior speed, accuracy, and stability. Moreover, through time-division soil image acquisition, diverse culture medium can be replaced in in situ root images, thereby enhancing dataset versatility. After validating the performance of the Improved_UNet network on the augmented dataset, the optimal results show a 0.63% increase in mean intersection over union, 0.41% in F1, and 0.04% in accuracy. In terms of generalization performance, the optimal results show a 33.6% increase in mean intersection over union, 28.11% in F1, and 2.62% in accuracy. The experimental results confirm the feasibility and practicality of the proposed dataset augmentation strategy. In the future, we plan to combine normal mapping with rendering software to achieve more accurate shading simulations of in situ roots. In addition, we aim to create a broader range of images that encompass various crop varieties and soil types.

Identifiers

PMID38629084
PMCPMC11020132

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.