Evidence map›Paper›PMID 38652174›Full record

ArticleMikrochimica acta2024

Aptamer decorated PDA@magnetic silica microparticles for bacteria purification.

Murat Kavruk, Zahra Babaie, Güneş Kibar, Barbaros Çetin, Hasan Yeşilkaya, Yassine Amrani, Ali Doğan Dursun, V Cengiz Özalp

Abstract read
In one paragraph

Article in Mikrochimica acta, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Murat KavrukDepartment of Medical Biology, Faculty of Medicine, İstanbul Aydın University, İstanbul, 34295, Türkiye.
Zahra BabaieMicrofluidics & Lab-on-a-chip Research Group, İ.D. Bilkent University, Ankara, 06800, Türkiye.
Güneş KibarMicrofluidics & Lab-on-a-chip Research Group, İ.D. Bilkent University, Ankara, 06800, Türkiye.
Barbaros ÇetinDepartment of Medical Biology, Faculty of Medicine, İstanbul Aydın University, İstanbul, 34295, Türkiye.
Hasan YeşilkayaDepartment Respiratory Sciences, University of Leicester, University Road, Leicester, LE1 7RH, UK.
Yassine AmraniDepartment Respiratory Sciences, University of Leicester, University Road, Leicester, LE1 7RH, UK.
Ali Doğan DursunDepartment of Physiology, School of Medicine, Atilim University, Ankara, 06830, Türkiye.
V Cengiz ÖzalpDepartment of Medical Biology, School of Medicine, Atilim University, Ankara, 06830, Türkiye. cengiz.ozalp@atilim.edu.tr.ORCID http://orcid.org/0000-0002-7659-5990

Funding

Royal Academy of Engineering 220N316Türkiye Bilimsel ve Teknolojik Araştırma Kurumu 220N316
6 · The paper itself

Abstract

One significant constraint in the advancement of biosensors is the signal-to-noise ratio, which is adversely affected by the presence of interfering factors such as blood in the sample matrix. In the present investigation, a specific aptamer binding was chosen for its affinity, while exhibiting no binding affinity towards non-target bacterial cells. This selective binding property was leveraged to facilitate the production of magnetic microparticles decorated with aptamers. A novel assay was developed to effectively isolate S. pneumoniae from PBS or directly from blood samples using an aptamer with an affinity constant of 72.8 nM. The capture experiments demonstrated efficiencies up to 87% and 66% are achievable for isolating spiked S. pneumoniae in 1 mL PBS and blood samples, respectively.

Indexed as

Aptamers, NucleotideSilicon DioxideBiosensing TechniquesHumansMagnetite NanoparticlesStreptococcus pneumoniaeAptamers, NucleotideMagnetite NanoparticlesSilicon DioxideAptamerAptasensorBiosensorMicrobeadsSELEXSuperparamagnetic

Identifiers

PMID38652174
PMCPMC11039557

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.