Evidence map›Paper›PMID 38677292›Full record

ArticleImmunity2024

Transcription factor Tox2 is required for metabolic adaptation and tissue residency of ILC3 in the gut.

Arundhoti Das, Gustavo Ulises Martinez-Ruiz, Nicolas Bouladoux, Apollo Stacy, Josquin Moraly, Maria Vega-Sendino, Yongge Zhao, Marieke Lavaert, Yi Ding, Abigail Morales-Sanchez and 15 more

Open access · greenAbstract read
In one paragraph

Article in Immunity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Dysregulated immunometabolism in gut inflammation.Acta biochimica et biophysica Sinica · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Regulation of innate lymphoid cell by microbial metabolites.Journal of molecular medicine (Berlin, Germany) · 2025
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 10 institutions in 4 countries.

Arundhoti DasLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Gustavo Ulises Martinez-RuizLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA; Faculty of Medicine, Research Division, National Autonomous University of Mexico, Mexico City, Mexico; Children's Hospital of Mexico Federico Gomez, Mexico City, Mexico.
Nicolas BouladouxMetaorganism Immunity Section, Laboratory of Host Immunity and Microbiome, NIAID, NIH, Bethesda, MD, USA.
Apollo StacyMetaorganism Immunity Section, Laboratory of Host Immunity and Microbiome, NIAID, NIH, Bethesda, MD, USA; Department of Cardiovascular and Metabolic Sciences, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Josquin MoralyPediatric Oncology Branch, National Cancer Institute, NIH, Bethesda, MD, USA.
Maria Vega-SendinoLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Yongge ZhaoLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Marieke LavaertLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Yi DingLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Abigail Morales-SanchezLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA; Children's Hospital of Mexico Federico Gomez, Mexico City, Mexico.
Christelle HarlyUniversité de Nantes, CNRS, Inserm, CRCINA, Nantes, France; LabEx IGO "Immunotherapy, Graft, Oncology," Nantes, France.
Mina O SeedhomLaboratory of Viral Diseases, NIAID, NIH, Bethesda, MD, USA.
Raj ChariGenome Modification Core, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Parirokh AwasthiMouse Modeling Core, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Tomoko IkeuchiOral Immunity and Infection Section, NIDCR, NIH, Bethesda, MD, USA.
Yueqiang WangShenzhen Typhoon HealthCare, Shenzhen, Guangdong, China.
Jinfang ZhuLaboratory of Immune System Biology, NIAID, NIH, Bethesda, MD, USA.
Niki M MoutsopoulosOral Immunity and Infection Section, NIDCR, NIH, Bethesda, MD, USA.
WanJun ChenMucosal Immunology Section, NIDCR, NIH, Bethesda, MD, USA.
Jonathan W YewdellLaboratory of Viral Diseases, NIAID, NIH, Bethesda, MD, USA.
Virginia Smith ShapiroDepartment of Immunology, Mayo Clinic, Rochester, MN, USA.
Sergio RuizLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA.
Naomi TaylorPediatric Oncology Branch, National Cancer Institute, NIH, Bethesda, MD, USA.
Yasmine BelkaidMetaorganism Immunity Section, Laboratory of Host Immunity and Microbiome, NIAID, NIH, Bethesda, MD, USA.
Avinash BhandoolaLaboratory of Genome Integrity, Center for Cancer Research, NCI, NIH, Bethesda, MD, USA. Electronic address: avinash.bhandoola@nih.gov.
Center for Cancer Research · USNational Institute of Allergy and Infectious Diseases · USBGI Group (China) · CNFrederick National Laboratory for Cancer Research · USNational Cancer Institute · USNational Institutes of Health · USHôpital Necker-Enfants Malades · FRInstitute of Infection and Immunity · CAMayo Clinic · USNantes Université · FR

Funding

Transcriptional Regulation of Immune Cell Development, Activation and FunctionsZIAAI001169 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI ZHU, JINFANG · 2012 to 2025
$21.8M
T cell Development and RegenerationZIABC011633 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BHANDOOLA, AVINASH · 2015 to 2025
$20.5M
Reprogramming hematopoietic stem cell (HSC) differentiation via metabolic conditZIABC011924 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TAYLOR, NAOMI · 2019 to 2025
$9.0M
Role of Tissue-Specific Factors in the Control of ImmunityZIAAI001132 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BELKAID, YASMINE · 2011 to 2025
$6.4M
Role of Vitamins in the Control of ImmunityZIAAI001133 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BELKAID, YASMINE · 2010 to 2025
$6.1M
Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC011633NCI NIH HHS HHSN261201500003CNCI NIH HHS HHSN261201500003I
6 · The paper itself

Abstract

Group 3 innate lymphoid cells (ILC3) are the major subset of gut-resident ILC with essential roles in infections and tissue repair, but how they adapt to the gut environment to maintain tissue residency is unclear. We report that Tox2 is critical for gut ILC3 maintenance and function. Gut ILC3 highly expressed Tox2, and depletion of Tox2 markedly decreased ILC3 in gut but not at central sites, resulting in defective control of Citrobacter rodentium infection. Single-cell transcriptional profiling revealed decreased expression of Hexokinase-2 in Tox2-deficient gut ILC3. Consistent with the requirement for hexokinases in glycolysis, Tox2

Indexed as

Citrobacter rodentiumEnterobacteriaceae InfectionsGlycolysisHMGB ProteinsImmunity, InnateLymphocytesMice, KnockoutAdaptation, PhysiologicalAnimalsGastrointestinal TractHexokinaseInterleukin-17MiceMice, Inbred C57BLTrans-ActivatorsHexokinaseHMGB ProteinsInterleukin-17Trans-ActivatorsglycolysisHIF-1αIL-17ILC3metabolic adaptationtissue residencyTox2

Identifiers

PMID38677292
PMCPMC11096055
OpenAlexW4395683928

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.