Evidence map›Paper›PMID 38693196›Full record

ArticleScientific reports2024

Helicobacter pylori infection in infant rhesus macaque monkeys is associated with an altered lung and oral microbiome.

Noah A Siegel, Monica T Jimenez, Clarissa Santos Rocha, Matthew Rolston, Satya Dandekar, Jay V Solnick, Lisa A Miller

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Noah A SiegelCalifornia National Primate Research Center, University of California Davis, Davis, CA, USA.
Monica T JimenezCalifornia National Primate Research Center, University of California Davis, Davis, CA, USA.
Clarissa Santos RochaDepartment of Medical Microbiology and Immunology, School of Medicine, University of California Davis, Davis, CA, USA.
Matthew RolstonDepartment of Medical Microbiology and Immunology, School of Medicine, University of California Davis, Davis, CA, USA.
Satya DandekarCalifornia National Primate Research Center, University of California Davis, Davis, CA, USA.
Jay V SolnickCalifornia National Primate Research Center, University of California Davis, Davis, CA, USA.
Lisa A MillerCalifornia National Primate Research Center, University of California Davis, Davis, CA, USA. lmiller@ucdavis.edu.
University of California, Davis · US

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
Role of Microbiome in Neonatal Lung Maturation and Immune SusceptibilityR01AI138553 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI MILLER, LISA A · 2018 to 2023
$2.9M
Role of Helicobacter Pylori in the Pathogenesis of Childhood AsthmaR56AI091893 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI MILLER, LISA A, SOLNICK, JAY V. · 2012 to 2012
$390k
NIAID NIH HHS R01 AI138553NIAID NIH HHS R56 AI091893NIH HHS P51 OD011107NIH HHS P51OD011107NIH HHS R01AI138553NIH HHS R56AI091893
6 · The paper itself

Abstract

It is estimated that more than half of the world population has been infected with Helicobacter pylori. Most newly acquired H. pylori infections occur in children before 10 years of age. We hypothesized that early life H. pylori infection could influence the composition of the microbiome at mucosal sites distant to the stomach. To test this hypothesis, we utilized the infant rhesus macaque monkey as an animal model of natural H. pylori colonization to determine the impact of infection on the lung and oral microbiome during a window of postnatal development. From a cohort of 4-7 month-old monkeys, gastric biopsy cultures identified 44% of animals infected by H. pylori. 16S ribosomal RNA gene sequencing of lung washes and buccal swabs from animals showed distinct profiles for the lung and oral microbiome, independent of H. pylori infection. In order of relative abundance, the lung microbiome was dominated by the phyla Proteobacteria, Firmicutes, Bacteroidota, Fusobacteriota, Campilobacterota and Actinobacteriota while the oral microbiome was dominated by Proteobacteria, Firmicutes, Bacteroidota, and Fusobacteriota. In comparison to the oral cavity, the lung was composed of more genera and species that significantly differed by H. pylori status, with a total of 6 genera and species that were increased in H. pylori negative infant monkey lungs. Lung, but not plasma IL-8 concentration was also associated with gastric H. pylori load and lung microbial composition. We found the infant rhesus macaque monkey lung harbors a microbiome signature that is distinct from that of the oral cavity during postnatal development. Gastric H. pylori colonization and IL-8 protein were linked to the composition of microbial communities in the lung and oral cavity. Collectively, these findings provide insight into how H. pylori infection might contribute to the gut-lung axis during early childhood and modulate future respiratory health.

Indexed as

Helicobacter InfectionsHelicobacter pyloriLungMacaca mulattaMicrobiotaMouthRNA, Ribosomal, 16SAnimalsDisease Models, AnimalMaleRNA, Ribosomal, 16S

Identifiers

PMID38693196
PMCPMC11063185
OpenAlexW4396545895

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.