Evidence map›Paper›PMID 38697119›Full record

ArticleImmunity2024

Lysosomal endonuclease RNase T2 and PLD exonucleases cooperatively generate RNA ligands for TLR7 activation.

Marleen Bérouti, Katja Lammens, Matthias Heiss, Larissa Hansbauer, Stefan Bauernfried, Jan Stöckl, Francesca Pinci, Ignazio Piseddu, Wilhelm Greulich, Meiyue Wang and 5 more

Abstract read
In one paragraph

Article in Immunity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Marleen BéroutiGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Katja LammensGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Matthias HeissDepartment of Chemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Larissa HansbauerGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Stefan BauernfriedGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Jan StöcklGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Francesca PinciGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Ignazio PisedduGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany; Department of Medicine II, University Hospital Munich, Munich, Germany.
Wilhelm GreulichGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Meiyue WangGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Christophe JungGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Thomas FröhlichGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Thomas CarellDepartment of Chemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Karl-Peter HopfnerGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany.
Veit HornungGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität, Munich, Germany. Electronic address: hornung@genzentrum.lmu.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toll-like receptor 7 (TLR7) is essential for recognition of RNA viruses and initiation of antiviral immunity. TLR7 contains two ligand-binding pockets that recognize different RNA degradation products: pocket 1 recognizes guanosine, while pocket 2 coordinates pyrimidine-rich RNA fragments. We found that the endonuclease RNase T2, along with 5' exonucleases PLD3 and PLD4, collaboratively generate the ligands for TLR7. Specifically, RNase T2 generated guanosine 2',3'-cyclic monophosphate-terminated RNA fragments. PLD exonuclease activity further released the terminal 2',3'-cyclic guanosine monophosphate (2',3'-cGMP) to engage pocket 1 and was also needed to generate RNA fragments for pocket 2. Loss-of-function studies in cell lines and primary cells confirmed the critical requirement for PLD activity. Biochemical and structural studies showed that PLD enzymes form homodimers with two ligand-binding sites important for activity. Previously identified disease-associated PLD mutants failed to form stable dimers. Together, our data provide a mechanistic basis for the detection of RNA fragments by TLR7.

Indexed as

EndoribonucleasesToll-Like Receptor 7AnimalsBinding SitesExonucleasesHEK293 CellsHumansLigandsLysosomesMicePhospholipase DRNAEndoribonucleasesExonucleasesLigandsPhospholipase Dribonuclease T(2)RNATLR7 protein, humanToll-Like Receptor 7plasmacytoid dendritic cellPLD3PLD4RNA sensingRNase T2TLR7

Identifiers

PMID38697119
PMCPMC11470960

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.