Evidence map›Paper›PMID 38702197›Full record

ReviewGenome research2024

Navigating the landscape of epitranscriptomics and host immunity.

Elaine Huang, Clara Frydman, Xinshu Xiao

Abstract readReview
In one paragraph

Review in Genome research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Recent Advances and Prospects in RNA Drug Development.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Elaine HuangBioinformatics Interdepartmental Program, University of California, Los Angeles, California 90095, USA.ORCID 0000-0003-2057-934X
Clara FrydmanBioinformatics Interdepartmental Program, University of California, Los Angeles, California 90095, USA.ORCID 0009-0000-9025-3690
Xinshu XiaoBioinformatics Interdepartmental Program, University of California, Los Angeles, California 90095, USA; gxxiao@ucla.edu.ORCID 0000-0002-9362-8029

Funding

Regulation and function of dsRNAs derived from retrotransposable elements in ADR01AG078950 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xinshu Grace Xiao · 2022 to 2026
$3.2M
Systematic approaches to deciphering regulation and function of RNA editing in brainR01MH123177 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI XIAO, XINSHU GRACE · 2021 to 2025
$3.1M
Exploiting public genomic and transcriptomic data to uncover cancer-RNA editing relationshipsR01CA262686 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xinshu Grace Xiao · 2022 to 2026
$1.9M
NCI NIH HHS R01 CA262686NIA NIH HHS R01 AG078950NIMH NIH HHS R01 MH123177
6 · The paper itself

Abstract

RNA modifications, also termed epitranscriptomic marks, encompass chemical alterations to individual nucleotides, including processes such as methylation and editing. These marks contribute to a wide range of biological processes, many of which are related to host immune system defense. The functions of immune-related RNA modifications can be categorized into three main groups: regulation of immunogenic RNAs, control of genes involved in innate immune response, and facilitation of adaptive immunity. Here, we provide an overview of recent research findings that elucidate the contributions of RNA modifications to each of these processes. We also discuss relevant methods for genome-wide identification of RNA modifications and their immunogenic substrates. Finally, we highlight recent advances in cancer immunotherapies that aim to reduce cancer cell viability by targeting the enzymes responsible for RNA modifications. Our presentation of these dynamic research avenues sets the stage for future investigations in this field.

Indexed as

Epigenesis, GeneticImmunity, InnateNeoplasmsTranscriptomeAdaptive ImmunityAnimalsHumansRNARNA Processing, Post-TranscriptionalRNA

Identifiers

PMID38702197
PMCPMC11146601

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.