Evidence map›Paper›PMID 38722686›Full record

ArticleThe Journal of clinical investigation2024

The IRE1α/XBP1 pathway sustains cytokine responses of group 3 innate lymphoid cells in inflammatory bowel disease.

Siyan Cao, Jose L Fachi, Kaiming Ma, Alina Ulezko Antonova, Qianli Wang, Zhangying Cai, Randal J Kaufman, Matthew A Ciorba, Parakkal Deepak, Marco Colonna

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  12. EnterohemorrhagicPathogens (Basel, Switzerland) · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Siyan CaoDivision of Gastroenterology, Department of Medicine and.
Jose L FachiDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Kaiming MaDivision of Gastroenterology, Department of Medicine and.
Alina Ulezko AntonovaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Qianli WangDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Zhangying CaiDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Randal J KaufmanDegenerative Diseases Program, Center for Genetic Disorders and Aging Research, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California, USA.
Matthew A CiorbaDivision of Gastroenterology, Department of Medicine and.
Parakkal DeepakDivision of Gastroenterology, Department of Medicine and.
Marco ColonnaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Jeffrey Wade Brown · 2000 to 2026
$30.8M
CLINICAL/LABORATORY TRAINING ACADEMIC GASTROENTEROLOGYT32DK007130 · NIDDK · WASHINGTON UNIVERSITY · PI MATTHEW AARON CIORBA · 1986 to 2026
$8.3M
Mucosal Immune Defense Mechanisms of the Urinary BladderR01DK132327 · NIDDK · WASHINGTON UNIVERSITY · PI MARCO COLONNA, SCOTT J. HULTGREN · 2023 to 2026
$2.5M
MICROBIOTA-DEPENDENT CONTROL OF CLOSTRIDIUM DIFFICILE: THE ROLE OF ACETATE AND IL-22 BINDING PROTEINR01DK126969 · NIDDK · WASHINGTON UNIVERSITY · PI COLONNA, MARCO · 2021 to 2024
$1.6M
Endoplasmic Reticulum Stress Controls Innate Lymphoid Cells in Intestinal InflammationK08DK140612 · NIDDK · WASHINGTON UNIVERSITY · PI Siyan Cao · 2024 to 2026
$501k
NIDDK NIH HHS K08 DK140612NIDDK NIH HHS P30 DK052574NIDDK NIH HHS R01 DK126969NIDDK NIH HHS R01 DK132327NIDDK NIH HHS T32 DK007130
6 · The paper itself

Abstract

Group 3 innate lymphoid cells (ILC3s) are key players in intestinal homeostasis. ER stress is linked to inflammatory bowel disease (IBD). Here, we used cell culture, mouse models, and human specimens to determine whether ER stress in ILC3s affects IBD pathophysiology. We show that mouse intestinal ILC3s exhibited a 24-hour rhythmic expression pattern of the master ER stress response regulator inositol-requiring kinase 1α/X-box-binding protein 1 (IRE1α/XBP1). Proinflammatory cytokine IL-23 selectively stimulated IRE1α/XBP1 in mouse ILC3s through mitochondrial ROS (mtROS). IRE1α/XBP1 was activated in ILC3s from mice exposed to experimental colitis and in inflamed human IBD specimens. Mice with Ire1α deletion in ILC3s (Ire1αΔRorc) showed reduced expression of the ER stress response and cytokine genes including Il22 in ILC3s and were highly vulnerable to infections and colitis. Administration of IL-22 counteracted their colitis susceptibility. In human ILC3s, IRE1 inhibitors suppressed cytokine production, which was upregulated by an IRE1 activator. Moreover, the frequencies of intestinal XBP1s+ ILC3s in patients with Crohn's disease before administration of ustekinumab, an anti-IL-12/IL-23 antibody, positively correlated with the response to treatment. We demonstrate that a noncanonical mtROS-IRE1α/XBP1 pathway augmented cytokine production by ILC3s and identify XBP1s+ ILC3s as a potential biomarker for predicting the response to anti-IL-23 therapies in IBD.

Indexed as

EndoribonucleasesImmunity, InnateInflammatory Bowel DiseasesProtein Serine-Threonine KinasesX-Box Binding Protein 1AnimalsCytokinesEndoplasmic Reticulum StressFemaleHumansLymphocytesMaleMiceMice, KnockoutSignal TransductionCytokinesEndoribonucleasesERN1 protein, humanErn1 protein, mouseProtein Serine-Threonine KinasesX-Box Binding Protein 1XBP1 protein, humanXbp1 protein, mouseCell stressGastroenterologyImmunologyInflammatory bowel diseaseInnate immunity

Identifiers

PMID38722686
PMCPMC11214543

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.