Evidence map›Paper›PMID 38738215›Full record

ArticleJournal of thoracic disease2024

Screening and identification of hub genes for ischemic cardiomyopathy and construction and validation of a clinical prognosis model using bioinformatics analysis.

Jing Wang, Liying Tang, Yuzhi Bai, Xia Zhao, Tian Tian, Christos G Mihos, Eva Maria Javier Delmo, Pei Li

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Article in Journal of thoracic disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Jing WangDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Liying TangDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Yuzhi BaiDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Xia ZhaoDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Tian TianDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Christos G MihosEchocardiography Laboratory, Columbia University Irving Medical Center, Division of Cardiology, Mount Sinai Heart Institute, Miami Beach, FL, USA.
Eva Maria Javier DelmoCharité Research Organization, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Pei LiDepartment of General Practice, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Myocardial ischemia and hypoxia may result in myocardial cell necrosis, scar formation, and hyperplasia. We aim to explore the differentially expressed genes (DEGs) in ischemic cardiomyopathy (ICM), construct and identify a clinical prognosis model using bioinformatics methods, so as to screen potential biomarkers of ICM to provide a basis for the early diagnosis and treatment of ICM. Methods: Based on the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database, R language was used to screen DEGs in healthy myocardial (n=5) and ICM myocardial tissues (n=12). DEGs were analyzed by Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and protein-protein interaction (PPI). Receiver operating characteristic (ROC) curves were drawn to verify the target genes. Results: A total of 259 genes with significantly changed fold change (FC) values were obtained through conditional screening, including up-regulated genes and down-regulated genes. The first two hub genes [interleukin-6 ( Conclusions: ICM is closely related to the changes of extracellular matrix (ECM) and oxidoreductase activity. The

Indexed as

bioinformatics analysisdifferentially expressed genes (DEGs)Ischemic cardiomyopathy (ICM)long non-coding RNA (lncRNA)

Identifiers

PMID38738215
PMCPMC11087634

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.