Evidence map›Paper›PMID 38742902›Full record

ArticleJournal of virology2024

LINC08148 promotes the caveola-mediated endocytosis of Zika virus through upregulating transcription of Src.

Zhiting Huo, Xuanfeng Zhu, Qinyu Peng, Cancan Chen, Xiaoyi Yang, Changbai Huang, Yincheng Xiang, Qingju Tian, Jingyu Liu, Chao Liu and 1 more

Abstract read
In one paragraph

Article in Journal of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Zhiting Huo *Key Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Xuanfeng Zhu *Key Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Qinyu PengKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Cancan ChenDepartment of Pathology, First Affiliated Hospital of Sun Yat-sen University, Guangzhou, China.
Xiaoyi YangKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Changbai HuangKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Yincheng XiangKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Qingju TianKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.
Jingyu LiuFood and Cosmetics Institute, Guangzhou Customs Technology Center, Guangzhou, China.
Chao LiuKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.ORCID 0000-0003-3863-7210
Ping ZhangKey Laboratory of Tropical Diseases Control (Sun Yat-sen University), Ministry of Education, Guangzhou, China.ORCID 0000-0002-5400-8767

Funding

GDSTC | Natural Science Foundation of Guangdong Province () 2022A1515010451Guangzhou Municipal Science and Technology Bureau (GZST) 202206010114MOST | National Natural Science Foundation of China (NSFC) 31970887, 82271385
6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) represent a new group of host factors involved in viral infection. Current study identified an intergenic lncRNA, LINC08148, as a proviral factor of Zika virus (ZIKV) and Dengue virus 2 (DENV2). Knockout (KO) or silencing of LINC08148 decreases the replication of ZIKV and DENV2. LINC08148 mainly acts at the endocytosis step of ZIKV but at a later stage of DENV2. RNA-seq analysis reveals that LINC08148 knockout downregulates the transcription levels of five endocytosis-related genes including IMPORTANCE: Long non-coding RNAs (lncRNAs), like proteins, participate in viral infection. However, functions of most lncRNAs remain unknown. In this study, we performed a functional screen based on microarray data and identified a new proviral lncRNA, LINC08148. Then, we uncovered that LINC08148 is involved in the caveola-mediated endocytosis of ZIKV, rather than the classical clathrin-mediated endocytosis. Mechanistically, LINC08148 upregulates the transcription of Src, an initiator of caveola-mediated endocytosis, through binding to its transcription factor SP1. This study identifies a new lncRNA involved in the ZIKV infection, suggesting lncRNAs and cellular proteins are closely linked and cooperate to regulate viral infection.

Indexed as

EndocytosisRNA, Long NoncodingVirus InternalizationZika VirusZika Virus InfectionAnimalsCaveolaeChlorocebus aethiopsDengue VirusHEK293 CellsHumansSp1 Transcription Factorsrc-Family KinasesUp-RegulationVero CellsVirus ReplicationRNA, Long NoncodingSP1 protein, humanSp1 Transcription Factorsrc-Family Kinasesendocytosishost factorinfectionlong non-coding RNAZika virus

Identifiers

PMID38742902
PMCPMC11237476

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.