Evidence map›Paper›PMID 38766310›Full record

ArticleEcology and evolution2024

Environmental DNA recovers fish composition turnover of the coral reefs of West Indian Ocean islands.

Mélissa Jaquier, Camille Albouy, Wilhelmine Bach, Conor Waldock, Virginie Marques, Eva Maire, Jean Baptiste Juhel, Marco Andrello, Alice Valentini, Stéphanie Manel and 3 more

Abstract read
In one paragraph

Article in Ecology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Mélissa JaquierEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.
Camille AlbouyEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.ORCID https://orcid.org/0000-0003-1629-2389
Wilhelmine BachEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.
Conor WaldockEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.ORCID https://orcid.org/0000-0002-2818-9859
Virginie MarquesEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.ORCID https://orcid.org/0000-0002-5142-4191
Eva MaireMARBEC, Univ. Montpellier, CNRS, Ifremer, IRD Montpellier France.
Jean Baptiste JuhelMARBEC, Univ. Montpellier, CNRS, Ifremer, IRD Montpellier France.ORCID https://orcid.org/0000-0003-2627-394X
Marco AndrelloMARBEC, Univ. Montpellier, CNRS, Ifremer, IRD Montpellier France.ORCID https://orcid.org/0000-0001-7590-2736
Alice ValentiniSPYGEN Le Bourget-du-Lac France.ORCID https://orcid.org/0000-0001-5829-5479
Stéphanie ManelCEFE, Univ. Montpellier, CNRS, EPHE-PSL University, IRD Montpellier France.
Tony DejeanSPYGEN Le Bourget-du-Lac France.
David MouillotMARBEC, Univ. Montpellier, CNRS, Ifremer, IRD Montpellier France.
Loïc PellissierEcosystems and Landscape Evolution, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science ETH Zürich Zürich Switzerland.ORCID https://orcid.org/0000-0002-2289-8259

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Islands have been used as model systems to study ecological and evolutionary processes, and they provide an ideal set-up for validating new biodiversity monitoring methods. The application of environmental DNA metabarcoding for monitoring marine biodiversity requires an understanding of the spatial scale of the eDNA signal, which is best tested in island systems. Here, we investigated the variation in Actinopterygii and Elasmobranchii species composition recovered from eDNA metabarcoding along a gradient of distance-to-reef in four of the five French Scattered Islands in the Western Indian Ocean. We collected surface water samples at an increasing distance from reefs (0 m, 250 m, 500 m, 750 m). We used a metabarcoding protocol based on the 'teleo' primers to target marine reef fishes and classified taxa according to their habitat types (benthic or pelagic). We investigated the effect of distance-to-reef on β diversity variation using generalised linear mixed models and estimated species-specific distance-to-reef effects using a model-based approach for community data. Environmental DNA metabarcoding analyses recovered distinct fish species compositions across the four inventoried islands and variations along the distance-to-reef gradient. The analysis of β

Indexed as

biodiversitybiomonitoringcoral reefdiffusionenvironmental DNAscattered islands

Identifiers

PMID38766310
PMCPMC11099785

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.