Evidence map›Paper›PMID 38773334›Full record

ArticleNature structural & molecular biology2024

eIF4A1 enhances LARP1-mediated translational repression during mTORC1 inhibition.

Yuichi Shichino, Tomokazu Yamaguchi, Kazuhiro Kashiwagi, Mari Mito, Mari Takahashi, Takuhiro Ito, Nicholas T Ingolia, Keiji Kuba, Shintaro Iwasaki

Abstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mechanometabolism instructs hematopoietic stem cell specification.The Journal of experimental medicine · 2026
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Conserved Functions of LARP1 Proteins in Eukaryotes.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuichi ShichinoRNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan. yuichi.shichino@riken.jp.ORCID http://orcid.org/0000-0002-0093-1185
Tomokazu YamaguchiDepartment of Biochemistry and Metabolic Science, Akita University Graduate School of Medicine, Akita, Japan.
Kazuhiro KashiwagiLaboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.ORCID http://orcid.org/0000-0001-6470-5817
Mari MitoRNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan.
Mari TakahashiLaboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.ORCID http://orcid.org/0000-0002-9995-0019
Takuhiro ItoLaboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.ORCID http://orcid.org/0000-0003-3704-5205
Nicholas T IngoliaDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-3395-1545
Keiji KubaDepartment of Biochemistry and Metabolic Science, Akita University Graduate School of Medicine, Akita, Japan.ORCID http://orcid.org/0000-0002-2203-5293
Shintaro IwasakiRNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan. shintaro.iwasaki@riken.jp.ORCID http://orcid.org/0000-0001-7724-3754

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic translation initiation factor (eIF)4A-a DEAD-box RNA-binding protein-plays an essential role in translation initiation. Recent reports have suggested helicase-dependent and helicase-independent functions for eIF4A, but the multifaceted roles of eIF4A have not been fully explored. Here we show that eIF4A1 enhances translational repression during the inhibition of mechanistic target of rapamycin complex 1 (mTORC1), an essential kinase complex controlling cell proliferation. RNA pulldown followed by sequencing revealed that eIF4A1 preferentially binds to mRNAs containing terminal oligopyrimidine (TOP) motifs, whose translation is rapidly repressed upon mTORC1 inhibition. This selective interaction depends on a La-related RNA-binding protein, LARP1. Ribosome profiling revealed that deletion of EIF4A1 attenuated the translational repression of TOP mRNAs upon mTORC1 inactivation. Moreover, eIF4A1 increases the interaction between TOP mRNAs and LARP1 and, thus, ensures stronger translational repression upon mTORC1 inhibition. Our data show the multimodality of eIF4A1 in modulating protein synthesis through an inhibitory binding partner and provide a unique example of the repressive role of a universal translational activator.

Indexed as

AutoantigensEukaryotic Initiation Factor-4AMechanistic Target of Rapamycin Complex 1Protein BiosynthesisRibonucleoproteinsSS-B AntigenAnimalsHEK293 CellsHumansProtein BindingRNA 5' Terminal Oligopyrimidine SequenceRNA, MessengerSS-A AntigenAutoantigensEukaryotic Initiation Factor-4AMechanistic Target of Rapamycin Complex 1RibonucleoproteinsRNA, MessengerSS-A AntigenSS-B Antigen

Identifiers

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.