Evidence map›Paper›PMID 38773359›Full record

ArticleBMC plant biology2024

Genome-wide characterization of LEA gene family reveals a positive role of BnaA.LEA6.a in freezing tolerance in rapeseed (Brassica napus L.).

Weiping Wang, Yan Liu, Yu Kang, Wei Liu, Shun Li, Zhonghua Wang, Xiaoyan Xia, Xiaoyu Chen, Lunwen Qian, Xinghua Xiong and 3 more

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
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  6. ThePlants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Weiping WangCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Yan LiuCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Yu KangCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Wei LiuCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Shun LiCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Zhonghua WangCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Xiaoyan XiaCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Xiaoyu ChenCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Lunwen QianCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Xinghua XiongCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Zhongsong LiuCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Chunyun GuanCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Xin HeCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China. hexinzhsh@126.com.

Funding

Program for Jiangsu Provincial Excellent Scientific and Technological Innovation Team 2022ZD0400901Science and Technology Innovation Program of Hunan Province 2020RC2057
6 · The paper itself

Abstract

backgroundFreezing stress is one of the major abiotic stresses that causes extensive damage to plants. LEA (Late embryogenesis abundant) proteins play a crucial role in plant growth, development, and abiotic stress. However, there is limited research on the function of LEA genes in low-temperature stress in Brassica napus (rapeseed).

resultsTotal 306 potential LEA genes were identified in B. rapa (79), B. oleracea (79) and B. napus (148) and divided into eight subgroups. LEA genes of the same subgroup had similar gene structures and predicted subcellular locations. Cis-regulatory elements analysis showed that the promoters of BnaLEA genes rich in cis-regulatory elements related to various abiotic stresses. Additionally, RNA-seq and real-time PCR results indicated that the majority of BnaLEA family members were highly expressed in senescent tissues of rapeseed, especially during late stages of seed maturation, and most BnaLEA genes can be induced by salt and osmotic stress. Interestingly, the BnaA.LEA6.a and BnaC.LEA6.a genes were highly expressed across different vegetative and reproductive organs during different development stages, and showed strong responses to salt, osmotic, and cold stress, particularly freezing stress. Further analysis showed that overexpression of BnaA.LEA6.a increased the freezing tolerance in rapeseed, as evidenced by lower relative electrical leakage and higher survival rates compared to the wild-type (WT) under freezing treatment.

conclusionThis study is of great significance for understanding the functions of BnaLEA genes in freezing tolerance in rapeseed and offers an ideal candidate gene (BnaA.LEA6.a) for molecular breeding of freezing-tolerant rapeseed cultivars.

Indexed as

Brassica napusFreezingPlant ProteinsCold-Shock ResponseGene Expression Regulation, PlantGenes, PlantGenome, PlantMultigene Familylate embryogenesis abundant protein, plantPlant ProteinsAbiotic stressBrassica napusFreezing stressLEA (Late embryogenesis abundant)

Identifiers

PMID38773359
PMCPMC11106994

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.