Evidence map›Paper›PMID 38791255›Full record

ArticleInternational journal of molecular sciences2024

Development of a Robust Read-Across Model for the Prediction of Biological Potency of Novel Peroxisome Proliferator-Activated Receptor Delta Agonists.

Maria Antoniou, Konstantinos D Papavasileiou, Georgia Melagraki, Francesco Dondero, Iseult Lynch, Antreas Afantitis

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maria AntoniouDepartment of Chemoinformatics, NovaMechanics Ltd., Nicosia 1046, Cyprus.ORCID 0009-0008-4552-6555
Konstantinos D PapavasileiouDepartment of Chemoinformatics, NovaMechanics Ltd., Nicosia 1046, Cyprus.
Georgia MelagrakiDivision of Physical Sciences & Applications, Hellenic Military Academy, 16672 Vari, Greece.
Francesco DonderoEntelos Institute, Larnaca 6059, Cyprus.ORCID 0000-0001-7945-3712
Iseult LynchEntelos Institute, Larnaca 6059, Cyprus.ORCID 0000-0003-4250-4584
Antreas AfantitisDepartment of Chemoinformatics, NovaMechanics Ltd., Nicosia 1046, Cyprus.ORCID 0000-0002-0977-8180

Funding

H2020 101037509
6 · The paper itself

Abstract

A robust predictive model was developed using 136 novel peroxisome proliferator-activated receptor delta (PPARδ) agonists, a distinct subtype of lipid-activated transcription factors of the nuclear receptor superfamily that regulate target genes by binding to characteristic sequences of DNA bases. The model employs various structural descriptors and docking calculations and provides predictions of the biological activity of PPARδ agonists, following the criteria of the Organization for Economic Co-operation and Development (OECD) for the development and validation of quantitative structure-activity relationship (QSAR) models. Specifically focused on small molecules, the model facilitates the identification of highly potent and selective PPARδ agonists and offers a read-across concept by providing the chemical neighbours of the compound under study. The model development process was conducted on Isalos Analytics Software (v. 0.1.17) which provides an intuitive environment for machine-learning applications. The final model was released as a user-friendly web tool and can be accessed through the Enalos Cloud platform's graphical user interface (GUI).

Indexed as

PPAR deltaQuantitative Structure-Activity RelationshipSoftwareHumansMachine LearningMolecular Docking SimulationPPAR deltain silico modellingIsalos Analytics Platformmachine learningmolecular dockingPPARδ agonists

Identifiers

PMID38791255
PMCPMC11121726

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.