Evidence map›Paper›PMID 38801599›Full record

ArticleEndocrine2024

Small RNA sequencing reveals snoRNAs and piRNA-019825 as novel players in diabetic kidney disease.

L M 't Hart, J A de Klerk, G A Bouland, J H D Peerlings, M T Blom, S J Cramer, R Bijkerk, J W J Beulens, R C Slieker

Abstract read
In one paragraph

Article in Endocrine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

L M 't HartDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands. lmthart@lumc.nl.ORCID 0000-0003-4401-2938
J A de KlerkDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.
G A BoulandDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.
J H D PeerlingsDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.
M T BlomHealth Behaviors & Chronic Diseases Research Program & Personalised Medicine Research Program, Amsterdam Public Health, Amsterdam, The Netherlands.
S J CramerDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.
R BijkerkDepartment of Internal Medicine, Division of Nephrology, Leiden University Medical Center, Leiden, The Netherlands.
J W J BeulensDepartment of Epidemiology and Data Sciences, Amsterdam University Medical Center, Location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.
R C SliekerDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.

Funding

Diabetes Fonds 459001015European Foundation for the Study of Diabetes Multi-System Challenges in DiabetesInnovative Medicines Initiative 115881Swiss State Secretariat for Education' Research and Innovation (SERI) 16.0097ZonMw 459001015
6 · The paper itself

Abstract

introductionMicro- and macrovascular complications are common among persons with type 2 diabetes. Recently there has been growing interest to investigate the potential of circulating small non-coding RNAs (sncRNAs) as contributors to the development of diabetic complications. In this study we investigate to what extent circulating sncRNAs levels associate with prevalent diabetic kidney disease (DKD) in persons with type 2 diabetes.

methodsPlasma sncRNAs levels were determined using small RNA-seq, allowing detection of miRNAs, snoRNAs, piRNAs, tRNA fragments, and various other sncRNA classes. We tested for differentially expressed sncRNAs in persons with type 2 diabetes, with DKD (n = 69) or without DKD (n = 405). In secondary analyses, we also tested the association with eGFR, albuminuria (UACR), and the plasma proteome.

resultsIn total seven sncRNAs were negatively associated with prevalent DKD (all P

conclusionWe have identified novel small non-coding RNAs, primarily from classes other than microRNAs, that are associated with diabetic kidney disease. Our results show that the involvement of small non-coding RNAs in DKD goes beyond the already known microRNAs and also involves other classes of sncRNA, in particular snoRNAs and the piRNA piR-019825, that have never been studied before in relation to kidney function.

Indexed as

Diabetes Mellitus, Type 2Diabetic NephropathiesRNA, Small InterferingRNA, Small NucleolarAgedAlbuminuriaFemaleGlomerular Filtration RateHumansMaleMicroRNAsMiddle AgedPiwi-Interacting RNASequence Analysis, RNAMicroRNAsMIRN143 microRNA, humanPiwi-Interacting RNARNA, Small InterferingRNA, Small NucleolarChronic kidney diseasemicroRNApiRNASmall RNAsnoRNAType 2 diabetes

Identifiers

PMID38801599
PMCPMC11445283

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.