Evidence map›Paper›PMID 38802444›Full record

ArticleScientific reports2024

Micropeptide AF127577.4-ORF hidden in a lncRNA diminishes glioblastoma cell proliferation via the modulation of ERK2/METTL3 interaction.

Baoshun Du, Zheying Zhang, Linlin Jia, Huan Zhang, Shuai Zhang, Haijun Wang, Zhenguo Cheng

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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  10. Microproteins unveiling new dimensions in cancer.Functional & integrative genomics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Baoshun DuDepartment of Neurosurgery, Xinxiang Central Hospital, Xinxiang, 453003, Henan, People's Republic of China.
Zheying ZhangDepartment of Pathology, Xinxiang Medical University, No. 601 Jinsui Avenue, Xinxiang, 453003, Henan, People's Republic of China. 081023@xxmu.edu.cn.
Linlin JiaDepartment of Critical Care Medicine, The Second Affiliated Hospital of Henan University of Science and Technology, Luoyang, 450053, Henan, People's Republic of China.
Huan ZhangDepartment of Neurosurgery, Xinxiang Central Hospital, Xinxiang, 453003, Henan, People's Republic of China.
Shuai ZhangDepartment of Pathology, Xinxiang Medical University, No. 601 Jinsui Avenue, Xinxiang, 453003, Henan, People's Republic of China.
Haijun WangDepartment of Pathology, Xinxiang Medical University, No. 601 Jinsui Avenue, Xinxiang, 453003, Henan, People's Republic of China.
Zhenguo ChengDepartment of Neurosurgery, Xinxiang Central Hospital, Xinxiang, 453003, Henan, People's Republic of China.

Funding

Henan Province medical science and technology research plan joint construction project LHGJ20210910the Doctoral Scientific Research Foundation of Xinxiang Medical University XYBSKYZZ201632Young Key Teachers in Colleges and Universities in Henan Province 2020GGJS150
6 · The paper itself

Abstract

Micropeptides hidden in long non-coding RNAs (lncRNAs) have been uncovered to program various cell-biological changes associated with malignant transformation-glioblastoma (GBM) cascade. Here, we identified and characterized a novel hidden micropeptide implicated in GBM. We screened potential candidate lncRNAs by establishing a workflow involving ribosome-bound lncRNAs, publicly available MS/MS data, and prognosis-related lncRNAs. Micropeptide expression was detected by western blot (WB), immunofluorescence (IF), and immunohistochemistry (IHC). Cell proliferation rate was assessed by calcein/PI staining and EdU assay. Proteins interacted with the micropeptide were analyzed by proteomics after co-immunoprecipitation (Co-IP). We discovered that lncRNA AF127577.4 indeed encoded an endogenous micropeptide, named AF127577.4-ORF. AF127577.4-ORF was associated with GBM clinical grade. In vitro, AF127577.4-ORF could suppress GBM cell proliferation. Moreover, AF127577.4-ORF reduced m6A methylation level of GBM cells. Mechanistically, AF127577.4-ORF diminished ERK2 interaction with m6A reader methyltransferase like 3 (METTL3) and downregulated phosphorylated ERK (p-ERK) level. The ERK inhibitor reduced p-ERK level and downregulated METTL3 protein expression. AF127577.4-ORF weakened the stability of METTL3 protein by ERK. Also, AF127577.4-ORF suppressed GBM cell proliferation via METTL3. Our study identifies a novel micropeptide AF127577.4-ORF hidden in a lncRNA, with a potent anti-proliferating function in GBM by diminishing METTL3 protein stability by reducing the ERK2/METTL3 interaction. This micropeptide may be beneficial for development of therapeutic strategies against GBM.

Indexed as

Cell ProliferationGlioblastomaMethyltransferasesMitogen-Activated Protein Kinase 1RNA, Long NoncodingBrain NeoplasmsCell Line, TumorGene Expression Regulation, NeoplasticHumansPeptidesMAPK1 protein, humanMethyltransferasesMETTL3 protein, humanMitogen-Activated Protein Kinase 1PeptidesRNA, Long NoncodingERK2GlioblastomalncRNA AF127577.4METTL3Micropeptide

Identifiers

PMID38802444
PMCPMC11130299

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.