Evidence map›Paper›PMID 38820154›Full record

ArticleScience advances2024

The KAT module of the SAGA complex maintains the oncogenic gene expression program in

Clare F Malone, Nathaniel W Mabe, Alexandra B Forman, Gabriela Alexe, Kathleen L Engel, Ying-Jiun C Chen, Melinda Soeung, Silvi Salhotra, Allen Basanthakumar, Bin Liu and 2 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
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  5. Review
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  9. Review
  10. Review
  11. Article
  12. Molecular regulation and therapeutic targeting ofFrontiers in cell and developmental biology · 2025
    Review
  13. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Clare F MaloneDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-1430-1774
Nathaniel W MabeDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0003-2675-652X
Alexandra B FormanDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-9375-0446
Gabriela AlexeDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-5668-6297
Kathleen L EngelDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0003-1426-0252
Ying-Jiun C ChenDepartment of Epigenetics and Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-6290-0771
Melinda SoeungDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-6902-898X
Silvi SalhotraDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Allen BasanthakumarDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Bin LiuDepartment of Epigenetics and Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Sharon Y R DentDepartment of Epigenetics and Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-4824-3269
Kimberly StegmaierDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0003-0218-7895

Funding

Tumor microenvironment-dependent therapy resistanceP01CA217959 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI Robbie G. Majzner · 2017 to 2026
$20.7M
Targeting Pediatric Cancer VulnerabilitiesR35CA283977 · NCI · DANA-FARBER CANCER INST · PI Kimberly Stegmaier · 2023 to 2026
$4.2M
Genetic and Molecular Definition of Histone Modifying Enzyme FunctionsR35GM131678 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DENT, SHARON Y. R. · 2019 to 2023
$2.0M
Defining PRC1.1 as a gatekeeper of lineage plasticity and response to anti-GD2 therapyR00CA279915 · NCI · PURDUE UNIVERSITY · PI Nathaniel Mabe · 2024 to 2026
$740k
Elucidating the role of the SAGA complex in MYCN-amplified neuroblastomaF32CA243266 · NCI · DANA-FARBER CANCER INST · PI MALONE, CLARE FELICITY · 2019 to 2021
$212k
Defining PRC1.1 as a gatekeeper of lineage plasticity and response to anti-GD2 therapyK99CA279915 · NCI · DANA-FARBER CANCER INST · PI MABE, NATHANIEL · 2023 to 2023
$147k
Elucidating the Role of Epigenetic Plasticity in anti-GD2 Immunotherapy ResponseF32CA261035 · NCI · DANA-FARBER CANCER INST · PI MABE, NATHANIEL · 2021 to 2022
$138k
NCI NIH HHS F32 CA243266NCI NIH HHS F32 CA261035NCI NIH HHS K99 CA279915NCI NIH HHS P01 CA217959NCI NIH HHS R00 CA279915NCI NIH HHS R35 CA283977NIGMS NIH HHS R35 GM131678
6 · The paper itself

Abstract

Pediatric cancers are frequently driven by genomic alterations that result in aberrant transcription factor activity. Here, we used functional genomic screens to identify multiple genes within the transcriptional coactivator Spt-Ada-Gcn5-acetyltransferase (SAGA) complex as selective dependencies for

Indexed as

Gene Expression Regulation, NeoplasticLysine AcetyltransferasesNeuroblastomaN-Myc Proto-Oncogene ProteinTrans-ActivatorsAcetylationAnimalsCell Line, TumorChromatinGene AmplificationHistone AcetyltransferasesHistonesHumansMiceChromatinHistone AcetyltransferasesHistonesLysine AcetyltransferasesMYCN protein, humanN-Myc Proto-Oncogene ProteinSAGA complex, mouseTrans-Activators

Identifiers

PMID38820154
PMCPMC11141635

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.