Evidence map›Paper›PMID 38822229›Full record

ArticleBMC plant biology2024

Molecular mechanism of brassinosteroids involved in root gravity response based on transcriptome analysis.

Qunwei Bai, Shurong Xuan, Wenjuan Li, Khawar Ali, Bowen Zheng, Hongyan Ren

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Qunwei BaiCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China.
Shurong XuanCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China.
Wenjuan LiCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China.
Khawar AliCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China.
Bowen ZhengCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China.
Hongyan RenCollege of Life Sciences, Shaanxi Normal University, Xi'an, Shaanxi Province, 710119, PR China. hong@snnu.edu.cn.

Funding

National Natural Science Foundation of China 31300193Natural Science Foundation of Shaanxi Province of China 2023-JC-QN-0201Natural Science Foundation of Shaanxi Province of China 2023-JC-YB-181Scientific research project of Shaanxi Academy of Basic Sciences 22JHQ066
6 · The paper itself

Abstract

backgroundBrassinosteroids (BRs) are a class of phytohormones that regulate a wide range of developmental processes in plants. BR-associated mutants display impaired growth and response to developmental and environmental stimuli.

resultsHere, we found that a BR-deficient mutant det2-1 displayed abnormal root gravitropic growth in Arabidopsis, which was not present in other BR mutants. To further elucidate the role of DET2 in gravity, we performed transcriptome sequencing and analysis of det2-1 and bri1-116, bri1 null mutant allele. Expression levels of auxin, gibberellin, cytokinin, and other related genes in the two mutants of det2-1 and bri1-116 were basically the same. However, we only found that a large number of JAZ (JASMONATE ZIM-domain) genes and jasmonate synthesis-related genes were upregulated in det2-1 mutant, suggesting increased levels of endogenous JA.

conclusionsOur results also suggested that DET2 not only plays a role in BR synthesis but may also be involved in JA regulation. Our study provides a new insight into the molecular mechanism of BRs on the root gravitropism.

Indexed as

ArabidopsisBrassinosteroidsGene Expression ProfilingGravitropismPlant RootsArabidopsis ProteinsGene Expression Regulation, PlantMutationOxylipinsPlant Growth RegulatorsTranscriptomeArabidopsis ProteinsBrassinosteroidsOxylipinsPlant Growth RegulatorsBrassinosteroidsDET2GravitropismPhytohormones

Identifiers

PMID38822229
PMCPMC11143716

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.