Evidence map›Paper›PMID 38829877›Full record

ArticlePloS one2024

Prognostic biomarkers of intracerebral hemorrhage identified using targeted proteomics and machine learning algorithms.

Shubham Misra, Yuki Kawamura, Praveen Singh, Shantanu Sengupta, Manabesh Nath, Zuhaibur Rahman, Pradeep Kumar, Amit Kumar, Praveen Aggarwal, Achal K Srivastava and 5 more

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shubham MisraDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.ORCID 0000-0002-4920-2573
Yuki KawamuraDepartment of Neurology, Yale University School of Medicine, New Haven, CT, United States of America.ORCID 0000-0003-2137-6464
Praveen SinghCSIR-Institute of Genomics and Integrative Biology, New Delhi, India.
Shantanu SenguptaCSIR-Institute of Genomics and Integrative Biology, New Delhi, India.
Manabesh NathDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Zuhaibur RahmanCSIR-Institute of Genomics and Integrative Biology, New Delhi, India.
Pradeep KumarDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Amit KumarDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Praveen AggarwalDepartment of Emergency Medicine, All India Institute of Medical Sciences, New Delhi, India.ORCID 0000-0002-4611-5458
Achal K SrivastavaDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Awadh K PanditDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Dheeraj MohaniaDepartment of Dr. RP Centre, All India Institute of Medical Sciences, New Delhi, India.
Kameshwar PrasadDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.
Nishant K MishraDepartment of Neurology, Yale University School of Medicine, New Haven, CT, United States of America.
Deepti VibhaDepartment of Neurology, All India Institute of Medical Sciences, New Delhi, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Early prognostication of patient outcomes in intracerebral hemorrhage (ICH) is critical for patient care. We aim to investigate protein biomarkers' role in prognosticating outcomes in ICH patients. We assessed 22 protein biomarkers using targeted proteomics in serum samples obtained from the ICH patient dataset (N = 150). We defined poor outcomes as modified Rankin scale score of 3-6. We incorporated clinical variables and protein biomarkers in regression models and random forest-based machine learning algorithms to predict poor outcomes and mortality. We report Odds Ratio (OR) or Hazard Ratio (HR) with 95% Confidence Interval (CI). We used five-fold cross-validation and bootstrapping for internal validation of prediction models. We included 149 patients for 90-day and 144 patients with ICH for 180-day outcome analyses. In multivariable logistic regression, UCH-L1 (adjusted OR 9.23; 95%CI 2.41-35.33), alpha-2-macroglobulin (aOR 5.57; 95%CI 1.26-24.59), and Serpin-A11 (aOR 9.33; 95%CI 1.09-79.94) were independent predictors of 90-day poor outcome; MMP-2 (aOR 6.32; 95%CI 1.82-21.90) was independent predictor of 180-day poor outcome. In multivariable Cox regression models, IGFBP-3 (aHR 2.08; 95%CI 1.24-3.48) predicted 90-day and MMP-9 (aOR 1.98; 95%CI 1.19-3.32) predicted 180-day mortality. Machine learning identified additional predictors, including haptoglobin for poor outcomes and UCH-L1, APO-C1, and MMP-2 for mortality prediction. Overall, random forest models outperformed regression models for predicting 180-day poor outcomes (AUC 0.89), and 90-day (AUC 0.81) and 180-day mortality (AUC 0.81). Serum biomarkers independently predicted short-term poor outcomes and mortality after ICH. Further research utilizing a multi-omics platform and temporal profiling is needed to explore additional biomarkers and refine predictive models for ICH prognosis.

Indexed as

BiomarkersCerebral HemorrhageMachine LearningProteomicsAgedAlgorithmsFemaleHumansMaleMiddle AgedPrognosisBiomarkers

Identifiers

PMID38829877
PMCPMC11146689

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.