ArticleScientific data2024
Gap-free chromosome-level genomes of male and female spotted longbarbel catfish Hemibagrus guttatus.
Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed.
- High-quality Chromosome-level genome assembly of male and female greater amberjack (Seriola dumerili).Scientific data · 2025Article
- Comparative Transcriptomic Analysis of Male and Female Gonads inAnimals : an open access journal from MDPI · 2025Article
- A complete telomere-to-telomere chromosome-level genome assembly of X-ray tetra (Pristella maxillaris).Scientific data · 2025Article
- A telomere-to-telomere chromosome-scale genome assembly of glass catfish (Kryptopterus vitreolus).Scientific data · 2025Article
- A chromosome-level genome assembly of the male darkbarbel catfish (Pelteobagrus vachelli) using PacBio HiFi and Hi-C data.Scientific data · 2025Article
- Chromosome-level genome assembly of flathead asp (Pseudaspius leptocephalus).Scientific data · 2025Article
- Gap-free chromosome-level genomes of male and female spotted longbarbel catfish Hemibagrus guttatus.Scientific data · 2024Article
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Hemibagrus guttatus, also named as spotted longbarbel catfish, is an economical fish in China. However, their gender cannot be easily distinguished from their appearance, which largely impedes their artificial breeding. Therefore, we provided two gap-free chromosome-level genomes of male and female spotted longbarbel catfish by combining wtdbg2, LR_Gapcloser and TGS-GapCloser assembly approaches with Hi-C data and accurate Pacbio HiFi long-reads. We assembled 30 chromosomes without any gap. Their genome sizes are approximately 749.1 Mb and 747.8 Mb of male and female individuals. The completeness results of BUSCO evaluation show about 94.2% and 95.0%, representing a high-level of completeness of both genomes. We also obtained 35,277 and 34,571 protein-coding gene sets from male and female individuals. Both available gap-free chromosome-level genomes of H. guttatus will provide excellent references for resequencing of male and female individuals to identify accurate markers for distinguishing gender of this fish.
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