Evidence map›Paper›PMID 38838261›Full record

ArticleACS nano2024

Comparing Multifunctional Viral and Eukaryotic Proteins for Generating Scission Necks in Membranes.

Haleh Alimohamadi, Elizabeth Wei-Chia Luo, Shivam Gupta, Jaime de Anda, Rena Yang, Taraknath Mandal, Gerard C L Wong

Abstract readComparative Study
In one paragraph

Article in ACS nano, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. SARS-CoV-2 peptide fragments selectively dysregulate specific immune cell populations via Gaussian curvature targeting.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Haleh AlimohamadiDepartment of Bioengineering, University of California, Los Angeles, Los Angeles, California 90025, United States.ORCID 0000-0001-6576-2426
Elizabeth Wei-Chia LuoDepartment of Bioengineering, University of California, Los Angeles, Los Angeles, California 90025, United States.ORCID 0000-0002-8663-0446
Shivam GuptaDepartment of Physics, Indian Institute of Technology Kanpur, Kanpur 208016, India.
Jaime de AndaDepartment of Bioengineering, University of California, Los Angeles, Los Angeles, California 90025, United States.ORCID 0000-0003-2129-0775
Rena YangDepartment of Bioengineering, University of California, Los Angeles, Los Angeles, California 90025, United States.
Taraknath MandalDepartment of Physics, Indian Institute of Technology Kanpur, Kanpur 208016, India.
Gerard C L WongDepartment of Bioengineering, University of California, Los Angeles, Los Angeles, California 90025, United States.ORCID 0000-0003-0893-6383

Funding

A Synchrotron Radiation Structural Biology ResourcesP30GM133894 · NIGMS · STANFORD UNIVERSITY · PI Aina E. Cohen, KEITH O HODGSON · 2020 to 2026
$43.3M
Vascular Biology Training GrantT32HL069766 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 2002 to 2022
$7.4M
American Heart Association-American Stroke Association 966662NHLBI NIH HHS T32 HL069766NIGMS NIH HHS P30 GM133894
6 · The paper itself

Abstract

Deterministic formation of membrane scission necks by protein machinery with multiplexed functions is critical in biology. A microbial example is M2 viroporin, a proton pump from the influenza A virus that is multiplexed with membrane remodeling activity to induce budding and scission in the host membrane during viral maturation. In comparison, the dynamin family constitutes a class of eukaryotic proteins implicated in mitochondrial fission, as well as various budding and endocytosis pathways. In the case of Dnm1, the mitochondrial fission protein in yeast, the membrane remodeling activity is multiplexed with mechanoenzyme activity to create fission necks. It is not clear why these functions are combined in these scission processes, which occur in drastically different compositions and solution conditions. In general, direct experimental access to changing neck sizes induced by individual proteins or peptide fragments is challenging due to the nanoscale dimensions and influence of thermal fluctuations. Here, we use a mechanical model to estimate the size of scission necks by leveraging small-angle X-ray scattering structural data of protein-lipid systems under different conditions. The influence of interfacial tension, lipid composition, and membrane budding morphology on the size of the induced scission necks is systematically investigated using our data and molecular dynamic simulations. We find that the M2 budding protein from the influenza A virus has robust pH-dependent membrane activity that induces nanoscopic necks within the range of spontaneous hemifission for a broad range of lipid compositions. In contrast, the sizes of scission necks generated by mitochondrial fission proteins strongly depend on lipid composition, which suggests a role for mechanical constriction.

Indexed as

Cell MembraneDynaminsInfluenza A virusScattering, Small AngleViral Matrix ProteinsViroporin ProteinsDynaminsM2 protein, Influenza A virusViral Matrix ProteinsViroporin Proteinslipid bilayermembrane−protein interactionsnegative Gaussian curvaturescission neckssmall-angle X-ray scattering

Identifiers

PMID38838261
PMCPMC11846687

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.