Evidence map›Paper›PMID 38838777›Full record

ArticleThe Journal of biological chemistry2024

Transmembrane helix interactions regulate oligomerization of the receptor tyrosine kinase EphA2.

Daniel Wirth, Ece Özdemir, William C Wimley, Elena B Pasquale, Kalina Hristova

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Eph receptor signaling complexes in the plasma membrane.Trends in biochemical sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Daniel WirthDepartment of Materials Science and Engineering, Johns Hopkins University, Baltimore, Maryland, USA.
Ece ÖzdemirDepartment of Materials Science and Engineering, Johns Hopkins University, Baltimore, Maryland, USA.
William C WimleyDepartment of Biochemistry and Molecular Biology, Tulane University School of Medicine, New Orleans, Louisiana, USA.
Elena B PasqualeCancer Metabolism and Microenvironment Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California, USA.
Kalina HristovaDepartment of Materials Science and Engineering, Johns Hopkins University, Baltimore, Maryland, USA. Electronic address: kh@jhu.edu.

Funding

Seeking the Physical Basis of AchondroplasiaR01GM068619 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI HRISTOVA, KALINA · 2004 to 2022
$5.4M
Ligand functional selectivity in EphA2 receptor signalingR01GM131374 · NIGMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Kalina Hristova, ELENA B PASQUALE · 2019 to 2026
$3.8M
NIGMS NIH HHS R01 GM068619NIGMS NIH HHS R01 GM131374
6 · The paper itself

Abstract

The transmembrane helices of receptor tyrosine kinases (RTKs) have been proposed to switch between two different dimeric conformations, one associated with the inactive RTK and the other with the active RTK. Furthermore, recent work has demonstrated that some full-length RTKs are associated into oligomers that are larger than dimers, raising questions about the roles of the TM helices in the assembly and function of these oligomers. Here we probe the roles of the TM helices in the assembly of EphA2 RTK oligomers in the plasma membrane. We employ mutagenesis to evaluate the relevance of a published NMR dimeric structure of the isolated EphA2 TM helix in the context of the full-length EphA2 in the plasma membrane. We use two fluorescence methods, Förster Resonance Energy Transfer and Fluorescence Intensity Fluctuations spectrometry, which yield complementary information about the EphA2 oligomerization process. These studies reveal that the TM helix mutations affect the stability, structure, and size of EphA2 oligomers. However, the effects are multifaceted and point to a more complex role of the TM helix than the one expected from the "TM dimer switch" model.

Indexed as

Protein MultimerizationReceptor, EphA2Cell MembraneFluorescence Resonance Energy TransferHumansMutationProtein Conformation, alpha-HelicalEPHA2 protein, humanReceptor, EphA2EphA2oligomerizationreceptor tyrosine kinasesingle-pass membrane receptortransmembrane domain

Identifiers

PMID38838777
PMCPMC11263659

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.