Evidence map›Paper›PMID 38845347›Full record

ReviewAnnals of botany2024

WHIRLY proteins, multi-layer regulators linking the nucleus and organelles in developmental and stress-induced senescence of plants.

Wenfang Lin, Dongmei Huang, Mengsi Li, Yujun Ren, Xiangzi Zheng, Binghua Wu, Ying Miao

Abstract readReview
In one paragraph

Review in Annals of botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. The leaves fall, yet the tree endures.Cellular and molecular life sciences : CMLS · 2025
    Review
  5. Functional Characterization of thePlants (Basel, Switzerland) · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Wenfang LinFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.
Dongmei HuangDepartment of Biochemistry and Molecular Biology, Xiamen Medical College, Xiamen 361023, China.
Mengsi LiFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.
Yujun RenFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.
Xiangzi ZhengFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.
Binghua WuFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.
Ying MiaoFujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, 350002 Fuzhou, China.ORCID 0000-0003-2220-455X

Funding

Fujian Provincial Key Laboratory of Plant Functional Biology FJ-PFB20201002National Natural Science Foundation of China 31470383Natural Science Foundation of Fujian Province 2021J02025Young Foundation of Fujian Provincial Education Department JAT200708
6 · The paper itself

Abstract

Plant senescence is an integrated programme of plant development that aims to remobilize nutrients and energy from senescing tissues to developing organs under developmental and stress-induced conditions. Upstream in the regulatory network, a small family of single-stranded DNA/RNA-binding proteins known as WHIRLYs occupy a central node, acting at multiple regulatory levels and via trans-localization between the nucleus and organelles. In this review, we summarize the current progress on the role of WHIRLY members in plant development and stress-induced senescence. WHIRLY proteins can be traced back in evolution to green algae. WHIRLY proteins trade off the balance of plant developmental senescence and stress-induced senescence through maintaining organelle genome stability via R-loop homeostasis, repressing the transcription at a configuration condition, and recruiting RNA to impact organelle RNA editing and splicing, as evidenced in several species. WHIRLY proteins also act as retrograde signal transducers between organelles and the nucleus through protein modification and stromule or vesicle trafficking. In addition, WHIRLY proteins interact with hormones, reactive oxygen species and environmental signals to orchestrate cell fate in an age-dependent manner. Finally, prospects for further research and promotion to improve crop production under environmental constraints are highlighted.

Indexed as

Cell NucleusOrganellesPlant SenescenceStress, PhysiologicalGene Expression Regulation, PlantPlant DevelopmentPlant ProteinsRNA-Binding ProteinsPlant ProteinsRNA-Binding ProteinsEvolutionaryorganelle–nucleus retrograde signalsplant developmental senescenceregulatory mechanismstress-induced senescenceWHIRLY family

Identifiers

PMID38845347
PMCPMC11523626

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.