Evidence map›Paper›PMID 38852153›Full record

ArticleOral diseases2025

Proliferative verrucous and homogeneous Leukoplakias exhibit differential methylation patterns.

Alejandro Herreros-Pomares, David Hervás, Leticia Bagán, Alex Proaño, José Bagan

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In one paragraph

Article in Oral diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Alejandro Herreros-PomaresDepartment of Biotechnology, Universitat Politècnica de València, Valencia, Spain.ORCID 0000-0003-3838-097X
David HervásDepartament of Applied Statistics and Operational Research, and Quality, Universitat Politècnica de València, Valencia, Spain.ORCID 0000-0003-0635-4961
Leticia BagánMedicina Oral Unit, Stomatology Department, Valencia University, Valencia, Spain.ORCID 0000-0002-4499-1999
Alex ProañoMedicina Oral Unit, Stomatology Department, Valencia University, Valencia, Spain.
José BaganCentro de Investigación Biomédica en Red Cáncer, CIBERONC, Madrid, Spain.ORCID 0000-0002-0295-2916

Funding

Instituto de Salud Carlos III
6 · The paper itself

Abstract

objectiveProliferative verrucous leukoplakia (PVL) is considered a clinically distinct entity from other oral leucoplakias (OLs) due to its clinical presentation and evolution. However, molecular differences between them remain unclear. We aimed to determine whether there are methylation differences between PVL and other forms of OLs. MATERIALS AND

methodsOral biopsies from 12 patients with PVL, eight patients with homogeneous leucoplakia (HL), and 10 healthy individuals were obtained for a genome-wide DNA methylation analysis via the Infinium EPIC Platform.

resultsA total of 1815 differentially methylated CpGs were found between PVL and HL, with a prominent state of hypermethylation in HL patients. CpGs covered 813 genes with distinct roles, including cell adhesion, extracellular matrix organization, and cell and synaptic signaling. 43% of these genes had been previously described in cancer and associated with prognosis. We developed a multinomial logistic regression model able to differentiate HL, PVL, and control samples. The model had a cross-validated estimate of 73% and included differentially methylated cancer-related genes between the pathological conditions and the healthy donors, including ADNP, BRCA2, CDK13, GNB1, NIN, NUMB, PIK3C2B, PTK2, SHISA4, THSD7B, WWP1, and ZNF292. It also included CpGs covering differentially methylated genes in HL (MEN1 and TNRC6B) and PVL (ACOXL, ADH1B, CAMTA1, CBFA2T3, CPXM2, LRFN2, SORCS2, and SPN).

conclusionsPVL and HL present differential methylation patterns that could be linked to their differential clinical behavior. Our findings show the potential of methylation markers and suggest novel diagnostic biomarkers.

Indexed as

DNA MethylationLeukoplakia, OralAdultAgedCase-Control StudiesCpG IslandsFemaleHumansMaleMiddle Ageddifferential methylationhomogeneous leukoplakiaoral leukoplakiaoral squamous cell carcinomaproliferative verrucous leukoplakia

Identifiers

PMID38852153
PMCPMC11808169

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.