Evidence map›Paper›PMID 38862494›Full record

ArticleNature communications2024

Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight.

Jiwoon Park, Eliah G Overbey, S Anand Narayanan, JangKeun Kim, Braden T Tierney, Namita Damle, Deena Najjar, Krista A Ryon, Jacqueline Proszynski, Ashley Kleinman and 14 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. [Mechanisms and protective strategies for astronaut skin injury in deep space environments].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
    Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Jiwoon ParkDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0003-0045-1429
Eliah G OverbeyDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-2866-8294
S Anand NarayananDepartment of Nutrition & Integrative Physiology, Florida State University, Tallahassee, FL, USA.
JangKeun KimDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-8733-9925
Braden T TierneyDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-7533-8802
Namita DamleDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Deena NajjarDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0009-0009-7950-2866
Krista A RyonDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Jacqueline ProszynskiDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Ashley KleinmanDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Jeremy Wain HirschbergDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Matthew MacKayDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Evan E AfshinDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Richard GransteinDepartment of Dermatology, Weill Cornell Medicine, New York, NY, USA.
Justin GurvitchDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-1277-4324
Briana M HudsonNanoString Technologies, Inc., Seattle, WA, USA.
Aric RiningerNanoString Technologies, Inc., Seattle, WA, USA.
Sean MullaneSpaceX, Hawthorne, CA, USA.
Sarah E ChurchNanoString Technologies, Inc., Seattle, WA, USA.ORCID http://orcid.org/0000-0002-7194-4282
Cem MeydanDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-0663-6216
George ChurchDepartment of Genetics, Harvard Medical School, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0001-6232-9969
Afshin BeheshtiStanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-4643-531X
Jaime MateusSpaceX, Hawthorne, CA, USA.
Christopher E MasonDepartment of Physiology, Biophysics and Systems Biology, Weill Cornell Medicine, New York, NY, USA. chm2042@med.cornell.edu.ORCID http://orcid.org/0000-0002-1850-1642

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Clinical and Molecular Heterogeneity in the Myelodysplastic SyndromesR01CA249054 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MASON, CHRISTOPHER EDWARD, PARK, CHRISTOPHER Y · 2020 to 2024
$3.5M
The Spatiotemporal Landscape of the Human Brain EpitranscriptomeR01MH117406 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI MASON, CHRISTOPHER EDWARD · 2018 to 2022
$3.3M
National Aeronautics and Space Administration (NASA) 80NSSC22K0254National Aeronautics and Space Administration (NASA) NNH18ZTT001N-FG2National Aeronautics and Space Administration (NASA) NNX17AB26GNCI NIH HHS P30 CA008748NCI NIH HHS R01 CA249054NIMH NIH HHS R01 MH117406U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) R01MH117406
6 · The paper itself

Abstract

Spaceflight can change metabolic, immunological, and biological homeostasis and cause skin rashes and irritation, yet the molecular basis remains unclear. To investigate the impact of short-duration spaceflight on the skin, we conducted skin biopsies on the Inspiration4 crew members before (L-44) and after (R + 1) flight. Leveraging multi-omics assays including GeoMx™ Digital Spatial Profiler, single-cell RNA/ATAC-seq, and metagenomics/metatranscriptomics, we assessed spatial gene expressions and associated microbial and immune changes across 95 skin regions in four compartments: outer epidermis, inner epidermis, outer dermis, and vasculature. Post-flight samples showed significant up-regulation of genes related to inflammation and KRAS signaling across all skin regions. These spaceflight-associated changes mapped to specific cellular responses, including altered interferon responses, DNA damage, epithelial barrier disruptions, T-cell migration, and hindered regeneration were located primarily in outer tissue compartments. We also linked epithelial disruption to microbial shifts in skin swab and immune cell activity to PBMC single-cell data from the same crew and timepoints. Our findings present the inaugural collection and examination of astronaut skin, offering insights for future space missions and response countermeasures.

Indexed as

InflammationProto-Oncogene Proteins p21(ras)SkinSpace FlightAdultFemaleGene Expression ProfilingHumansMaleMetagenomicsMiddle AgedMultiomicsSingle-Cell AnalysisKRAS protein, humanProto-Oncogene Proteins p21(ras)

Identifiers

PMID38862494
PMCPMC11166909

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.