Evidence map›Paper›PMID 38886340›Full record

ArticleNature communications2024

Rft1 catalyzes lipid-linked oligosaccharide translocation across the ER membrane.

Shuai Chen, Cai-Xia Pei, Si Xu, Hanjie Li, Yi-Shi Liu, Yicheng Wang, Cheng Jin, Neta Dean, Xiao-Dong Gao

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Glycan-related genes and genetic disorders.Journal of human genetics · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shuai ChenKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, China.ORCID http://orcid.org/0009-0000-5936-1415
Cai-Xia PeiState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0001-7187-0271
Si XuKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, China.
Hanjie LiKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, China.
Yi-Shi LiuKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, China.
Yicheng WangState Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0001-7789-1938
Cheng JinState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China. jinc@im.ac.cn.ORCID http://orcid.org/0000-0002-1514-6374
Neta DeanDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, USA. neta.dean@stonybrook.edu.ORCID http://orcid.org/0000-0003-1969-0008
Xiao-Dong GaoKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, China. xdgao@ipe.ac.cn.ORCID http://orcid.org/0000-0002-8575-5095

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31971216National Natural Science Foundation of China (National Science Foundation of China) 32271342
6 · The paper itself

Abstract

The eukaryotic asparagine (N)-linked glycan is pre-assembled as a fourteen-sugar oligosaccharide on a lipid carrier in the endoplasmic reticulum (ER). Seven sugars are first added to dolichol pyrophosphate (PP-Dol) on the cytoplasmic face of the ER, generating Man5GlcNAc2-PP-Dol (M5GN2-PP-Dol). M5GN2-PP-Dol is then flipped across the bilayer into the lumen by an ER translocator. Genetic studies identified Rft1 as the M5GN2-PP-Dol flippase in vivo but are at odds with biochemical data suggesting Rft1 is dispensable for flipping in vitro. Thus, the question of whether Rft1 plays a direct or an indirect role during M5GN2-PP-Dol translocation has been controversial for over two decades. We describe a completely reconstituted in vitro assay for M5GN2-PP-Dol translocation and demonstrate that purified Rft1 catalyzes the translocation of M5GN2-PP-Dol across the lipid bilayer. These data, combined with in vitro results demonstrating substrate selectivity and rft1∆ phenotypes, confirm the molecular identity of Rft1 as the M5GN2-PP-Dol ER flippase.

Indexed as

Endoplasmic ReticulumBiological TransportDolichol PhosphatesIntracellular MembranesLipid BilayersLipopolysaccharidesOligosaccharidesPhospholipid Transfer ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDolichol PhosphatesLipid Bilayerslipid-linked oligosaccharidesLipopolysaccharidesOligosaccharidesPhospholipid Transfer ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID38886340
PMCPMC11182771

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.