Evidence map›Paper›PMID 38909071›Full record

ArticleScientific data2024

Microbial co-occurrence network demonstrates spatial and climatic trends for global soil diversity.

Nikos Pechlivanis, Georgios Karakatsoulis, Konstantinos Kyritsis, Maria Tsagiopoulou, Stefanos Sgardelis, Ilias Kappas, Fotis Psomopoulos

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nikos PechlivanisInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thermi, 57001, Thessaloniki, Greece.ORCID 0000-0003-2502-612X
Georgios KarakatsoulisInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thermi, 57001, Thessaloniki, Greece.
Konstantinos KyritsisInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thermi, 57001, Thessaloniki, Greece.
Maria TsagiopoulouCentro Nacional de Analisis Genomico (CNAG), C/Baldiri Reixac 4, 08028, Barcelona, Spain.
Stefanos SgardelisDepartment of Ecology, School of Biology, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece.
Ilias KappasDepartment of Genetics, Development and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece.
Fotis PsomopoulosInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thermi, 57001, Thessaloniki, Greece. fpsom@certh.gr.ORCID 0000-0002-0222-4273

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite recent research efforts to explore the co-occurrence patterns of diverse microbes within soil microbial communities, a substantial knowledge-gap persists regarding global climate influences on soil microbiota behaviour. Comprehending co-occurrence patterns within distinct geoclimatic groups is pivotal for unravelling the ecological structure of microbial communities, that are crucial for preserving ecosystem functions and services. Our study addresses this gap by examining global climatic patterns of microbial diversity. Using data from the Earth Microbiome Project, we analyse a meta-community co-occurrence network for bacterial communities. This method unveils substantial shifts in topological features, highlighting regional and climatic trends. Arid, Polar, and Tropical zones show lower diversity but maintain denser networks, whereas Temperate and Cold zones display higher diversity alongside more modular networks. Furthermore, it identifies significant co-occurrence patterns across diverse climatic regions. Central taxa associated with different climates are pinpointed, highlighting climate's pivotal role in community structure. In conclusion, our study identifies significant correlations between microbial interactions in diverse climatic regions, contributing valuable insights into the intricate dynamics of soil microbiota.

Indexed as

ClimateMicrobiotaSoil MicrobiologyBacteriaBiodiversity

Identifiers

PMID38909071
PMCPMC11193810

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.