Evidence map›Paper›PMID 38923692›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2024

An ANXA11 P93S variant dysregulates TDP-43 and causes corticobasal syndrome.

Allison Snyder, Veronica H Ryan, James Hawrot, Sydney Lawton, Daniel M Ramos, Y Andy Qi, Kory R Johnson, Xylena Reed, Nicholas L Johnson, Aaron W Kollasch and 11 more

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. ANXA11 Variant-Associated Adult-Onset Myopathy: A Novel Phenotype.Annals of Indian Academy of Neurology · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. An ANXA11 P93S variant dysregulates TDP-43 and causes corticobasal syndrome.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
  16. Article
4 · The record

Corrections and comments

  • Update of
    An2023
5 · Who and what money

Authors and funding

21 authors.

Allison SnyderNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.ORCID 0000-0002-1857-928X
Veronica H RyanCenter for Alzheimer's and Related Dementias, National Institutes of Health, Bethesda, Maryland, USA.
James HawrotNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.
Sydney LawtonNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.
Daniel M RamosCenter for Alzheimer's and Related Dementias, National Institutes of Health, Bethesda, Maryland, USA.
Y Andy QiCenter for Alzheimer's and Related Dementias, National Institutes of Health, Bethesda, Maryland, USA.
Kory R JohnsonIntramural Bioinformatics Core, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.
Xylena ReedCenter for Alzheimer's and Related Dementias, National Institutes of Health, Bethesda, Maryland, USA.
Nicholas L JohnsonCenter for Alzheimer's and Related Dementias, National Institutes of Health, Bethesda, Maryland, USA.
Aaron W KollaschDepartment of Systems Biology, Harvard Medical School, Boston, Massachusetts, USA.
Megan F DuffyCell Biology and Gene Expression Section, Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, Maryland, USA.
Lawren VandeVredeMemory and Aging Center, Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco, San Francisco, California, USA.
J Nicholas CochranHudsonAlpha Institute for Biotechnology, Huntsville, Alabama, USA.
Bruce L MillerMemory and Aging Center, Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco, San Francisco, California, USA.
Camilo ToroUndiagnosed Diseases Program, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Bibiana BielekovaNeuroimmunological Diseases Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Debora S MarksDepartment of Systems Biology, Harvard Medical School, Boston, Massachusetts, USA.
Jennifer S YokoyamaMemory and Aging Center, Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco, San Francisco, California, USA.
Justin Y KwanNational Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.
Mark R CooksonCell Biology and Gene Expression Section, Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, Maryland, USA.
Michael E WardNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, USA.ORCID 0000-0002-5296-8051

Funding

Harmonized Data-Derived Resources for the Alzheimer's Disease and Related Dementias CommunityZIAAG000534 · NIA · NATIONAL INSTITUTE ON AGING · PI COOKSON, MARK · 2019 to 2025
$85.1M
TDP-43 Loss-of-Function: Biology to BiomarkersP01AG019724 · NIA · UNIVERSITY OF PENNSYLVANIA · PI Jennifer Merrilees · 2002 to 2026
$67.2M
Project 2: Biomarker Analysis, Non-Genetic Risk Factors, and Their Genetic InteractionsU19AG079774 · NIA · UNIVERSITY OF PENNSYLVANIA · PI LI-SAN WANG · 2023 to 2026
$39.4M
Research Education ComponentP30AG062422 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Gil Dan Rabinovici · 2019 to 2026
$36.9M
PrPSc SPECIFIC INTERACTION WITH NOVEL PrP-Fc FUSION PROTEINSP50AG023501 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, YADONG · 2004 to 2018
$27.1M
Mechanisms of inherited neurodegenerative diseasesZIANS003155 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI WARD, MICHAEL · 2016 to 2025
$24.7M
Comprehensive multimodal analysis of patients with neuroimmunological diseasesZIAAI001242 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BIELEKOVA, BIBIANA · 2019 to 2025
$12.9M
Tau Metabolism in FTD: From Gene Mutations to Molecular Chaperones and Lysosomal ProteasesU54NS123985 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AGARD, DAVID A., KAO, AIMEE · 2021 to 2025
$9.0M
Bioinformatics Core Facility ZICNS009443 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI JOHNSON, KORY · 2022 to 2025
$8.5M
US-South American Initiative for Genetic-Neural-Behavioral Interactions in Human Neurodegenerative ResearchR01AG057234 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Claudia Duran-Aniotz, Agustin M. Ibanez · 2019 to 2026
$6.1M
Elucidating clinical heterogeneity in early-onset AD via genomics, transcriptomics, and neuroimagingR01AG062588 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI YOKOYAMA, JENNIFER S · 2019 to 2023
$4.0M
Developing a single cell map of the aging human brain relevant to Alzheimer's diseaseZIAAG000539 · NIA · NATIONAL INSTITUTE ON AGING · PI COOKSON, MARK · 2020 to 2025
$1.7M
Alzheimer's AssociationBluefield Project to Cure Frontotemporal DementiaChan-Zuckerberg Initiative's Neurodegeneration Challenge NetworkFrench FoundationGlobal Brain Health InstituteHudsonAlpha Foundation Memory and Mobility FundIntramural NIH HHS ZIA AG000534Intramural NIH HHS ZIA AG000539Intramural Research Programs of the National Institute of Neurological Disorders and StrokeLarry L. Hillblom Foundation 2016-A-005-SUPMary Oakley FoundationNational Institute of Allergy and Infectious DiseasesNIA NIH HHS K01 AG049152NIA NIH HHS K23 AG073514NIA NIH HHS P01 AG019724NIA NIH HHS P30 AG062422NIA NIH HHS P50 AG023501NIA NIH HHS R00 AG068271NIA NIH HHS R01 AG057234NIA NIH HHS R01 AG062588NIA NIH HHS U19 AG079774NIA NIH HHS ZIAAG000534NIDA NIH HHS 75N95022C00031NIGMS NIH HHS FI2 GM142475NIH National Institute of General Medical Sciences FI2GM142475NIH National Institute of Neurological Disorders and Stroke U54NS123985NIH National Institute on Aging 1ZIAAG000539-01NIH National Institute on Aging K01AG049152NIH National Institute on Aging K23AG073514NIH National Institute on Aging P01AG019724NIH National Institute on Aging P01AG1972403NIH National Institute on Aging P30AG062422NIH National Institute on Aging P50AG023501NIH National Institute on Aging R00AG068271NIH National Institute on Aging R01AG057234NIH National Institute on Aging R01AG062588NIH National Institute on Aging U19AG079774NIH Office of Intramural Training and EducationNIH Undiagnosed Diseases Program, Undiagnosed Diseases NetworkNINDS NIH HHS U54 NS123985Rainwater Charitable Foundation
6 · The paper itself

Abstract

introductionVariants of uncertain significance (VUS) surged with affordable genetic testing, posing challenges for determining pathogenicity. We examine the pathogenicity of a novel VUS P93S in Annexin A11 (ANXA11) - an amyotrophic lateral sclerosis/frontotemporal dementia-associated gene - in a corticobasal syndrome kindred. Established ANXA11 mutations cause ANXA11 aggregation, altered lysosomal-RNA granule co-trafficking, and transactive response DNA binding protein of 43 kDa (TDP-43) mis-localization.

methodsWe described the clinical presentation and explored the phenotypic diversity of ANXA11 variants. P93S's effect on ANXA11 function and TDP-43 biology was characterized in induced pluripotent stem cell-derived neurons alongside multiomic neuronal and microglial profiling.

resultsANXA11 mutations were linked to corticobasal syndrome cases. P93S led to decreased lysosome colocalization, neuritic RNA, and nuclear TDP-43 with cryptic exon expression. Multiomic microglial signatures implicated immune dysregulation and interferon signaling pathways. DISCUSSION: This study establishes ANXA11 P93S pathogenicity, broadens the phenotypic spectrum of ANXA11 mutations, underscores neuronal and microglial dysfunction in ANXA11 pathophysiology, and demonstrates the potential of cellular models to determine variant pathogenicity. HIGHLIGHTS: ANXA11 P93S is a pathogenic variant. Corticobasal syndrome is part of the ANXA11 phenotypic spectrum. Hybridization chain reaction fluorescence in situ hybridization (HCR FISH) is a new tool for the detection of cryptic exons due to TDP-43-related loss of splicing regulation. Microglial ANXA11 and related immune pathways are important drivers of disease. Cellular models are powerful tools for adjudicating variants of uncertain significance.

Indexed as

AnnexinsDNA-Binding ProteinsAgedAmyotrophic Lateral SclerosisFemaleFrontotemporal DementiaHumansMaleMiddle AgedMutationNeuronsAnnexinsDNA-Binding ProteinsTARDBP protein, humanANXA11corticobasal syndromeTDP‐43variant of uncertain significance

Identifiers

PMID38923692
PMCPMC11350008

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.